Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC022662.1-201ENST00000580252 331 ntBASIC3.19□□□□□ -1.9
SRP54P61011 AL353997.4-201ENST00000586196 166 ntBASIC3.19□□□□□ -1.9
SRP54P61011 AC008507.1-201ENST00000587506 734 ntBASIC3.19□□□□□ -1.9
SRP54P61011 BBIP1P1-201ENST00000602999 279 ntBASIC3.19□□□□□ -1.9
SRP54P61011 AC011451.2-201ENST00000604303 598 ntBASIC3.19□□□□□ -1.9
SRP54P61011 AC106052.1-201ENST00000608029 497 ntBASIC3.19□□□□□ -1.9
SRP54P61011 AC245297.2-201ENST00000610119 565 ntBASIC3.19□□□□□ -1.9
SRP54P61011 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SRP54P61011 AC002550.2-201ENST00000621246 394 ntBASIC3.19□□□□□ -1.9
SRP54P61011 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
SRP54P61011 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SRP54P61011 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SRP54P61011 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SRP54P61011 AL353743.1-202ENST00000431724 1695 ntBASIC3.18□□□□□ -1.9
SRP54P61011 API5P2-201ENST00000397055 1498 ntBASIC3.18□□□□□ -1.9
SRP54P61011 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SRP54P61011 GNG5P1-201ENST00000255500 204 ntBASIC3.18□□□□□ -1.9
SRP54P61011 RNU6-343P-201ENST00000364709 104 ntBASIC3.18□□□□□ -1.9
SRP54P61011 RNU6-359P-201ENST00000365466 108 ntBASIC3.18□□□□□ -1.9
SRP54P61011 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SRP54P61011 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.18□□□□□ -1.9
SRP54P61011 RNU6-636P-201ENST00000384598 107 ntBASIC3.18□□□□□ -1.9
SRP54P61011 MIR887-201ENST00000401258 79 ntBASIC3.18□□□□□ -1.9
SRP54P61011 NDUFB4P4-201ENST00000404822 243 ntBASIC3.18□□□□□ -1.9
SRP54P61011 RPL5P18-201ENST00000406671 891 ntBASIC3.18□□□□□ -1.9
SRP54P61011 AC096664.2-201ENST00000411843 406 ntBASIC3.18□□□□□ -1.9
SRP54P61011 MTCO2P8-201ENST00000412213 658 ntBASIC3.18□□□□□ -1.9
SRP54P61011 AC245291.1-201ENST00000419501 328 ntBASIC3.18□□□□□ -1.9
SRP54P61011 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.18□□□□□ -1.9
SRP54P61011 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP54P61011 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.18□□□□□ -1.9
SRP54P61011 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.18□□□□□ -1.9
SRP54P61011 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP54P61011 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.18□□□□□ -1.9
SRP54P61011 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP54P61011 AL590664.1-201ENST00000448065 339 ntBASIC3.18□□□□□ -1.9
SRP54P61011 AC234775.1-201ENST00000454247 670 ntBASIC3.18□□□□□ -1.9
SRP54P61011 USP9YP10-201ENST00000454868 628 ntBASIC3.18□□□□□ -1.9
SRP54P61011 BX322784.1-201ENST00000455793 1077 ntBASIC3.18□□□□□ -1.9
SRP54P61011 AL359385.1-201ENST00000456509 365 ntBASIC3.18□□□□□ -1.9
SRP54P61011 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.18□□□□□ -1.9
SRP54P61011 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.18□□□□□ -1.9
SRP54P61011 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SRP54P61011 AL359273.1-201ENST00000510918 627 ntBASIC3.18□□□□□ -1.9
SRP54P61011 SNORA31.1-201ENST00000515993 133 ntBASIC3.18□□□□□ -1.9
SRP54P61011 SNORA31.5-201ENST00000516190 133 ntBASIC3.18□□□□□ -1.9
SRP54P61011 RNU6-528P-201ENST00000516926 100 ntBASIC3.18□□□□□ -1.9
SRP54P61011 AC007536.1-201ENST00000533382 349 ntBASIC3.18□□□□□ -1.9
SRP54P61011 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.18□□□□□ -1.9
SRP54P61011 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.18□□□□□ -1.9
SRP54P61011 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.18□□□□□ -1.9
SRP54P61011 MIR4325-201ENST00000583049 90 ntBASIC3.18□□□□□ -1.9
SRP54P61011 AC105224.1-201ENST00000587055 421 ntBASIC3.18□□□□□ -1.9
SRP54P61011 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP54P61011 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP54P61011 AL162274.2-201ENST00000614406 332 ntBASIC3.18□□□□□ -1.9
SRP54P61011 AL590099.1-201ENST00000615276 138 ntBASIC3.18□□□□□ -1.9
SRP54P61011 AC090897.3-201ENST00000636973 1157 ntBASIC3.18□□□□□ -1.9
SRP54P61011 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.18□□□□□ -1.9
SRP54P61011 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.18□□□□□ -1.9
SRP54P61011 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SRP54P61011 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SRP54P61011 AC011477.1-204ENST00000623416 1325 ntBASIC3.18□□□□□ -1.9
SRP54P61011 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SRP54P61011 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SRP54P61011 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SRP54P61011 MIR30E-201ENST00000362104 92 ntBASIC3.17□□□□□ -1.9
SRP54P61011 RNA5SP383-201ENST00000362934 120 ntBASIC3.17□□□□□ -1.9
SRP54P61011 RNU1-101P-201ENST00000391171 127 ntBASIC3.17□□□□□ -1.9
SRP54P61011 RNA5SP38-201ENST00000410750 119 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AC007899.1-201ENST00000412776 775 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP54P61011 MTCYBP38-201ENST00000417160 1123 ntBASIC3.17□□□□□ -1.9
SRP54P61011 TMEM167AP1-201ENST00000423409 219 ntBASIC3.17□□□□□ -1.9
SRP54P61011 MTCO2P23-201ENST00000425216 680 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.17□□□□□ -1.9
SRP54P61011 AC093151.1-201ENST00000427711 313 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP54P61011 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.17□□□□□ -1.9
SRP54P61011 NDUFB4P6-201ENST00000436819 366 ntBASIC3.17□□□□□ -1.9
SRP54P61011 THAP5P1-201ENST00000439089 262 ntBASIC3.17□□□□□ -1.9
SRP54P61011 MTND5P14-201ENST00000441481 1267 ntBASIC3.17□□□□□ -1.9
SRP54P61011 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP54P61011 AC002381.1-201ENST00000447049 280 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AL592447.1-201ENST00000447592 540 ntBASIC3.17□□□□□ -1.9
SRP54P61011 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP54P61011 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.17□□□□□ -1.9
SRP54P61011 RPL30P14-201ENST00000482744 348 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AC006445.1-201ENST00000491925 405 ntBASIC3.17□□□□□ -1.9
SRP54P61011 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP54P61011 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.17□□□□□ -1.9
SRP54P61011 FABP5P12-201ENST00000515543 389 ntBASIC3.17□□□□□ -1.9
SRP54P61011 RNU6-150P-201ENST00000516237 95 ntBASIC3.17□□□□□ -1.9
SRP54P61011 RNU6-714P-201ENST00000516963 103 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.17□□□□□ -1.9
SRP54P61011 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.17□□□□□ -1.9
SRP54P61011 AL132857.1-201ENST00000555180 708 ntBASIC3.17□□□□□ -1.9
SRP54P61011 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP54P61011 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.17□□□□□ -1.9
SRP54P61011 MIR2682-201ENST00000580305 110 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms