Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 RPS25P9-201ENST00000435591 252 ntBASIC2.85□□□□□ -1.95
LIM2P55344 AC009969.1-201ENST00000438726 172 ntBASIC2.85□□□□□ -1.95
LIM2P55344 MTCYBP34-201ENST00000439552 670 ntBASIC2.85□□□□□ -1.95
LIM2P55344 MTND3P1-201ENST00000441336 220 ntBASIC2.85□□□□□ -1.95
LIM2P55344 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LIM2P55344 RPS3AP12-201ENST00000443616 753 ntBASIC2.85□□□□□ -1.95
LIM2P55344 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.85□□□□□ -1.95
LIM2P55344 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.85□□□□□ -1.95
LIM2P55344 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.85□□□□□ -1.95
LIM2P55344 RPL23AP31-201ENST00000456160 467 ntBASIC2.85□□□□□ -1.95
LIM2P55344 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.85□□□□□ -1.95
LIM2P55344 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.85□□□□□ -1.95
LIM2P55344 AC068724.1-201ENST00000487100 792 ntBASIC2.85□□□□□ -1.95
LIM2P55344 AC023424.2-201ENST00000493479 777 ntBASIC2.85□□□□□ -1.95
LIM2P55344 RPL7P23-201ENST00000493874 747 ntBASIC2.85□□□□□ -1.95
LIM2P55344 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.85□□□□□ -1.95
LIM2P55344 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
LIM2P55344 AC034244.1-201ENST00000507687 207 ntBASIC2.85□□□□□ -1.95
LIM2P55344 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.85□□□□□ -1.95
LIM2P55344 SNORA70.24-201ENST00000517233 118 ntBASIC2.85□□□□□ -1.95
LIM2P55344 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.85□□□□□ -1.95
LIM2P55344 AC103783.1-201ENST00000520506 373 ntBASIC2.85□□□□□ -1.95
LIM2P55344 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.85□□□□□ -1.95
LIM2P55344 SNRPGP16-201ENST00000533275 226 ntBASIC2.85□□□□□ -1.95
LIM2P55344 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.85□□□□□ -1.95
LIM2P55344 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.85□□□□□ -1.95
LIM2P55344 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.85□□□□□ -1.95
LIM2P55344 BNIP3P22-201ENST00000593399 556 ntBASIC2.85□□□□□ -1.95
LIM2P55344 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.85□□□□□ -1.95
LIM2P55344 AL391001.1-201ENST00000602747 715 ntBASIC2.85□□□□□ -1.95
LIM2P55344 TUG1_1.1-201ENST00000610654 145 ntBASIC2.85□□□□□ -1.95
LIM2P55344 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.85□□□□□ -1.95
LIM2P55344 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.85□□□□□ -1.95
LIM2P55344 AC007318.2-201ENST00000620999 243 ntBASIC2.85□□□□□ -1.95
LIM2P55344 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
LIM2P55344 AC093010.3-201ENST00000570269 15214 ntBASIC2.85□□□□□ -1.95
LIM2P55344 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.85□□□□□ -1.95
LIM2P55344 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
LIM2P55344 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LIM2P55344 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.85□□□□□ -1.95
LIM2P55344 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LIM2P55344 AC091152.2-201ENST00000591628 2569 ntBASIC2.84□□□□□ -1.95
LIM2P55344 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.84□□□□□ -1.95
LIM2P55344 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.84□□□□□ -1.95
LIM2P55344 RNU6-882P-201ENST00000391025 103 ntBASIC2.84□□□□□ -1.95
LIM2P55344 USP9YP33-201ENST00000412220 421 ntBASIC2.84□□□□□ -1.95
LIM2P55344 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.84□□□□□ -1.95
LIM2P55344 CCDC58P2-201ENST00000417131 366 ntBASIC2.84□□□□□ -1.95
LIM2P55344 USP9YP35-201ENST00000435696 412 ntBASIC2.84□□□□□ -1.95
LIM2P55344 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.84□□□□□ -1.95
LIM2P55344 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.84□□□□□ -1.95
LIM2P55344 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.84□□□□□ -1.95
LIM2P55344 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.84□□□□□ -1.95
LIM2P55344 MTND1P9-201ENST00000453775 944 ntBASIC2.84□□□□□ -1.95
LIM2P55344 NECAP1P2-201ENST00000455668 727 ntBASIC2.84□□□□□ -1.95
LIM2P55344 ANKRD26P4-201ENST00000455755 950 ntBASIC2.84□□□□□ -1.95
LIM2P55344 USP9YP25-201ENST00000457708 443 ntBASIC2.84□□□□□ -1.95
LIM2P55344 snoU13.8-201ENST00000458890 104 ntBASIC2.84□□□□□ -1.95
LIM2P55344 RPL27AP5-201ENST00000469428 449 ntBASIC2.84□□□□□ -1.95
LIM2P55344 AC117440.1-201ENST00000474107 571 ntBASIC2.84□□□□□ -1.95
LIM2P55344 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.84□□□□□ -1.95
LIM2P55344 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.84□□□□□ -1.95
LIM2P55344 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LIM2P55344 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.84□□□□□ -1.95
LIM2P55344 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.84□□□□□ -1.95
LIM2P55344 AC026427.2-201ENST00000506228 536 ntBASIC2.84□□□□□ -1.95
LIM2P55344 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.84□□□□□ -1.95
LIM2P55344 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.84□□□□□ -1.95
LIM2P55344 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.84□□□□□ -1.95
LIM2P55344 AC022483.1-201ENST00000514020 567 ntBASIC2.84□□□□□ -1.95
LIM2P55344 AC009812.2-201ENST00000517657 457 ntBASIC2.84□□□□□ -1.95
LIM2P55344 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.84□□□□□ -1.95
LIM2P55344 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.84□□□□□ -1.95
LIM2P55344 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.84□□□□□ -1.95
LIM2P55344 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.84□□□□□ -1.95
LIM2P55344 FAM60BP-201ENST00000578364 658 ntBASIC2.84□□□□□ -1.95
LIM2P55344 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.84□□□□□ -1.95
LIM2P55344 AL596327.1-201ENST00000603629 213 ntBASIC2.84□□□□□ -1.95
LIM2P55344 AC012443.1-201ENST00000605605 231 ntBASIC2.84□□□□□ -1.95
LIM2P55344 MIR6130-201ENST00000619419 109 ntBASIC2.84□□□□□ -1.95
LIM2P55344 XIST_intron.1-201ENST00000619444 68 ntBASIC2.84□□□□□ -1.95
LIM2P55344 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.84□□□□□ -1.95
LIM2P55344 AL035425.3-201ENST00000564206 4996 ntBASIC2.84□□□□□ -1.96
LIM2P55344 AL022578.1-201ENST00000439330 1433 ntBASIC2.84□□□□□ -1.96
LIM2P55344 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LIM2P55344 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.83□□□□□ -1.96
LIM2P55344 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC2.83□□□□□ -1.96
LIM2P55344 AC092447.10-201ENST00000620607 1652 ntBASIC2.83□□□□□ -1.96
LIM2P55344 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
LIM2P55344 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.83□□□□□ -1.96
LIM2P55344 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
LIM2P55344 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LIM2P55344 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LIM2P55344 AL161781.1-201ENST00000354277 403 ntBASIC2.83□□□□□ -1.96
LIM2P55344 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LIM2P55344 RNU6-462P-201ENST00000362659 105 ntBASIC2.83□□□□□ -1.96
LIM2P55344 RNU6-157P-201ENST00000383957 107 ntBASIC2.83□□□□□ -1.96
LIM2P55344 RNU6-83P-201ENST00000384568 112 ntBASIC2.83□□□□□ -1.96
LIM2P55344 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LIM2P55344 RNU6-952P-201ENST00000391164 108 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms