Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 BNIP3P2-201ENST00000441221 577 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 HMGN2P7-201ENST00000456186 273 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC126389.1-201ENST00000477436 290 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 RNU6-1281P-201ENST00000516223 105 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 SNORD27.1-201ENST00000516319 72 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 RNA5SP92-201ENST00000516437 110 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 OR4H12P-201ENST00000556269 907 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC012443.1-201ENST00000605605 231 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC023043.4-201ENST00000612081 449 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC110801.1-201ENST00000623590 212 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AC008785.1-201ENST00000624475 456 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 AP001350.1-201ENST00000601906 1524 ntBASIC4.39□□□□□ -1.71
MKS1Q9NXB0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.39□□□□□ -1.71
MKS1Q9NXB0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 MAPK10-253ENST00000641010 4072 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AC073343.1-201ENST00000328239 651 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 RNU6-1158P-201ENST00000391167 107 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AC097374.1-203ENST00000400783 485 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 TXNP7-201ENST00000406296 293 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 MIR1178-201ENST00000408396 91 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 RNU2-39P-201ENST00000410604 198 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 RNA5SP39-201ENST00000411245 120 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AMD1P2-201ENST00000412936 992 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 RBMY1KP-201ENST00000423480 476 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 MTATP6P16-201ENST00000434543 526 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 RPL7P28-201ENST00000437739 740 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 CYCSP43-201ENST00000438233 310 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 PTMAP6-201ENST00000439110 327 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AC083798.1-201ENST00000472671 131 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 RPL32P9-201ENST00000487963 407 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AC026427.2-201ENST00000506228 536 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 SNORA70.14-201ENST00000516205 110 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 RNU6-1092P-201ENST00000516955 87 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 MTND1P35-201ENST00000526739 508 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AC093012.1-202ENST00000549403 582 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 MIR3667-201ENST00000581025 74 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 OR7E18P-201ENST00000592589 702 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AC020634.1-201ENST00000608701 549 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AC002553.4-201ENST00000616896 331 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 MIR6853-201ENST00000619642 74 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 AC087385.3-201ENST00000620477 187 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 C4BPAP1-201ENST00000415474 1893 ntBASIC4.38□□□□□ -1.71
MKS1Q9NXB0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MKS1Q9NXB0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC092326.2-201ENST00000624772 1561 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 Y_RNA.89-201ENST00000363031 102 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 RNU6-960P-201ENST00000364056 120 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 RNU6-606P-201ENST00000384721 111 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC004552.1-201ENST00000419089 348 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 SDCBPP3-201ENST00000419629 891 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AL606489.2-201ENST00000433886 234 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 RPL21P112-201ENST00000434403 463 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 RPL23AP93-201ENST00000440847 484 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 DDX3P2-201ENST00000446138 111 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 NFU1P2-201ENST00000448700 469 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.37□□□□□ -1.71
MKS1Q9NXB0 CEACAMP4-201ENST00000457676 421 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 RPL31P58-201ENST00000469001 379 ntBASIC4.37□□□□□ -1.71
MKS1Q9NXB0 RPS26P3-201ENST00000470205 348 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms