Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC008083.2-201ENST00000546707 476 ntBASIC1.55□□□□□ -2.16
TFF3Q07654 SUB1P3-201ENST00000564581 315 ntBASIC1.55□□□□□ -2.16
TFF3Q07654 MIR4716-201ENST00000579628 84 ntBASIC1.55□□□□□ -2.16
TFF3Q07654 AC104307.1-201ENST00000616142 196 ntBASIC1.55□□□□□ -2.16
TFF3Q07654 MIR8070-201ENST00000616510 88 ntBASIC1.55□□□□□ -2.16
TFF3Q07654 MIR7111-201ENST00000619751 72 ntBASIC1.55□□□□□ -2.16
TFF3Q07654 WWP1P1-201ENST00000466609 2769 ntBASIC1.55□□□□□ -2.16
TFF3Q07654 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
TFF3Q07654 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
TFF3Q07654 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
TFF3Q07654 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TFF3Q07654 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.54□□□□□ -2.16
TFF3Q07654 AL596028.1-201ENST00000326971 197 ntBASIC1.54□□□□□ -2.16
TFF3Q07654 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
TFF3Q07654 RNY1P10-201ENST00000363268 113 ntBASIC1.54□□□□□ -2.16
TFF3Q07654 Z98749.2-208ENST00000381646 500 ntBASIC1.54□□□□□ -2.16
TFF3Q07654 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
TFF3Q07654 XKRYP4-201ENST00000414395 483 ntBASIC1.54□□□□□ -2.16
TFF3Q07654 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.54□□□□□ -2.16
TFF3Q07654 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.54□□□□□ -2.16
TFF3Q07654 HSFY3P-201ENST00000444242 1191 ntBASIC1.54□□□□□ -2.16
TFF3Q07654 XKRYP5-201ENST00000449659 483 ntBASIC1.54□□□□□ -2.16
TFF3Q07654 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.54□□□□□ -2.16
TFF3Q07654 RPS29P12-201ENST00000460178 152 ntBASIC1.54□□□□□ -2.16
TFF3Q07654 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
TFF3Q07654 AC132942.1-201ENST00000486753 483 ntBASIC1.54□□□□□ -2.16
TFF3Q07654 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.54□□□□□ -2.16
TFF3Q07654 RPS3AP4-201ENST00000555161 764 ntBASIC1.54□□□□□ -2.16
TFF3Q07654 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.54□□□□□ -2.16
TFF3Q07654 AL589935.2-201ENST00000616471 1231 ntBASIC1.54□□□□□ -2.16
TFF3Q07654 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
TFF3Q07654 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.54□□□□□ -2.16
TFF3Q07654 MIR337-201ENST00000362281 93 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TFF3Q07654 FO393413.1-201ENST00000402892 195 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 RNU4-74P-201ENST00000411280 161 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 RPL23AP39-201ENST00000415533 405 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 RPS15AP12-201ENST00000419498 388 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 HMGN2P19-201ENST00000425149 265 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.53□□□□□ -2.16
TFF3Q07654 RPS7P5-201ENST00000441482 581 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 USP9YP15-201ENST00000442391 422 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 Z96811.1-201ENST00000445880 108 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 AL163540.1-201ENST00000485382 386 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.53□□□□□ -2.16
TFF3Q07654 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.53□□□□□ -2.16
TFF3Q07654 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.53□□□□□ -2.16
TFF3Q07654 TRMT112P2-201ENST00000512910 132 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.53□□□□□ -2.16
TFF3Q07654 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.53□□□□□ -2.16
TFF3Q07654 SUB1P1-201ENST00000524415 382 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC1.53□□□□□ -2.16
TFF3Q07654 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.53□□□□□ -2.16
TFF3Q07654 AC007375.1-201ENST00000554513 578 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 DNAJC19P9-201ENST00000555084 351 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 AC090751.1-201ENST00000566966 267 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 MIR4458-201ENST00000578872 75 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.53□□□□□ -2.16
TFF3Q07654 AC123786.2-201ENST00000603459 275 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 AC098657.3-201ENST00000620434 263 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.53□□□□□ -2.16
TFF3Q07654 HPVC1-201ENST00000629899 1198 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 CFTRP2-201ENST00000634304 199 ntBASIC1.53□□□□□ -2.16
TFF3Q07654 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
TFF3Q07654 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
TFF3Q07654 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TFF3Q07654 AL359715.4-201ENST00000606629 1436 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TFF3Q07654 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TFF3Q07654 RPS7P9-201ENST00000414704 586 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.52□□□□□ -2.17
TFF3Q07654 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.52□□□□□ -2.17
TFF3Q07654 MTCYBP45-201ENST00000435243 565 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 AL590762.3-201ENST00000436372 640 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 AL451074.3-201ENST00000437709 472 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 AC011753.1-201ENST00000451001 220 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 AC108734.3-201ENST00000481241 1165 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 AC140059.1-201ENST00000489238 361 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 AC022493.1-201ENST00000492984 337 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TFF3Q07654 AC109471.1-201ENST00000511631 612 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.52□□□□□ -2.17
TFF3Q07654 HSPE1P14-201ENST00000605812 302 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 MIR502-201ENST00000606349 86 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 AC024560.3-201ENST00000608482 349 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 AC009570.1-201ENST00000609599 745 ntBASIC1.52□□□□□ -2.17
TFF3Q07654 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
TFF3Q07654 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
TFF3Q07654 MTND4P34-201ENST00000572715 1371 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TFF3Q07654 MIR124-3-201ENST00000384866 87 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 AL356057.2-201ENST00000403318 432 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 AL030996.1-201ENST00000411430 235 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 AL513331.1-201ENST00000411908 397 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 Z75741.2-201ENST00000417272 1167 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.51□□□□□ -2.17
TFF3Q07654 AL645568.3-201ENST00000433683 316 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 TRAPPC2P9-201ENST00000434556 343 ntBASIC1.51□□□□□ -2.17
TFF3Q07654 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.51□□□□□ -2.17
TFF3Q07654 PGBD4P3-201ENST00000440731 581 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms