Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.47□□□□□ -2.01
RPA3P35244 AC108938.1-201ENST00000451204 136 ntBASIC2.47□□□□□ -2.01
RPA3P35244 MTND2P3-201ENST00000452458 470 ntBASIC2.47□□□□□ -2.01
RPA3P35244 AL109741.2-201ENST00000455561 343 ntBASIC2.47□□□□□ -2.01
RPA3P35244 TPRKBP1-201ENST00000456243 481 ntBASIC2.47□□□□□ -2.01
RPA3P35244 AC006390.1-201ENST00000508068 283 ntBASIC2.47□□□□□ -2.01
RPA3P35244 AC010468.3-201ENST00000508225 458 ntBASIC2.47□□□□□ -2.01
RPA3P35244 RNU6-1102P-201ENST00000516149 96 ntBASIC2.47□□□□□ -2.01
RPA3P35244 SNORA70.16-201ENST00000516390 95 ntBASIC2.47□□□□□ -2.01
RPA3P35244 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RPA3P35244 AP003467.2-201ENST00000520175 319 ntBASIC2.47□□□□□ -2.01
RPA3P35244 AP000867.2-201ENST00000532468 320 ntBASIC2.47□□□□□ -2.01
RPA3P35244 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.47□□□□□ -2.01
RPA3P35244 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.47□□□□□ -2.01
RPA3P35244 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.47□□□□□ -2.01
RPA3P35244 AC010738.1-201ENST00000604970 987 ntBASIC2.47□□□□□ -2.01
RPA3P35244 AC008083.4-201ENST00000615076 444 ntBASIC2.47□□□□□ -2.01
RPA3P35244 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.47□□□□□ -2.01
RPA3P35244 AC007275.1-201ENST00000621243 671 ntBASIC2.47□□□□□ -2.01
RPA3P35244 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.47□□□□□ -2.01
RPA3P35244 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.46□□□□□ -2.02
RPA3P35244 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.46□□□□□ -2.02
RPA3P35244 FTLP6-201ENST00000355274 422 ntBASIC2.46□□□□□ -2.02
RPA3P35244 VTRNA1-1-201ENST00000363120 99 ntBASIC2.46□□□□□ -2.02
RPA3P35244 RNU6-173P-201ENST00000364215 104 ntBASIC2.46□□□□□ -2.02
RPA3P35244 RNU6-650P-201ENST00000365658 111 ntBASIC2.46□□□□□ -2.02
RPA3P35244 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RPA3P35244 AL024474.1-201ENST00000404655 591 ntBASIC2.46□□□□□ -2.02
RPA3P35244 UBE2V1P15-201ENST00000407776 448 ntBASIC2.46□□□□□ -2.02
RPA3P35244 HMGN2P35-201ENST00000412164 270 ntBASIC2.46□□□□□ -2.02
RPA3P35244 AC109583.1-201ENST00000432156 268 ntBASIC2.46□□□□□ -2.02
RPA3P35244 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
RPA3P35244 AC004866.2-201ENST00000438285 481 ntBASIC2.46□□□□□ -2.02
RPA3P35244 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RPA3P35244 Z96811.1-201ENST00000445880 108 ntBASIC2.46□□□□□ -2.02
RPA3P35244 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.46□□□□□ -2.02
RPA3P35244 snoU109.4-201ENST00000458953 143 ntBASIC2.46□□□□□ -2.02
RPA3P35244 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.46□□□□□ -2.02
RPA3P35244 AC084024.2-201ENST00000503480 791 ntBASIC2.46□□□□□ -2.02
RPA3P35244 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.46□□□□□ -2.02
RPA3P35244 AC048346.1-201ENST00000510247 144 ntBASIC2.46□□□□□ -2.02
RPA3P35244 AC112673.1-201ENST00000513168 575 ntBASIC2.46□□□□□ -2.02
RPA3P35244 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.46□□□□□ -2.02
RPA3P35244 NBEAP1-201ENST00000554452 979 ntBASIC2.46□□□□□ -2.02
RPA3P35244 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RPA3P35244 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.46□□□□□ -2.02
RPA3P35244 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.46□□□□□ -2.02
RPA3P35244 ZNF92P2-201ENST00000600543 1059 ntBASIC2.46□□□□□ -2.02
RPA3P35244 AL022099.1-201ENST00000604551 712 ntBASIC2.46□□□□□ -2.02
RPA3P35244 AL512283.1-201ENST00000606756 1384 ntBASIC2.46□□□□□ -2.02
RPA3P35244 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.45□□□□□ -2.02
RPA3P35244 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
RPA3P35244 OR1L1-202ENST00000373686 1083 ntBASIC2.45□□□□□ -2.02
RPA3P35244 SNORA51.6-201ENST00000384151 125 ntBASIC2.45□□□□□ -2.02
RPA3P35244 SNORD116-23-201ENST00000384645 92 ntBASIC2.45□□□□□ -2.02
RPA3P35244 RPL21P75-201ENST00000396599 483 ntBASIC2.45□□□□□ -2.02
RPA3P35244 RPL21P28-201ENST00000401418 483 ntBASIC2.45□□□□□ -2.02
RPA3P35244 AL592114.1-201ENST00000403842 483 ntBASIC2.45□□□□□ -2.02
RPA3P35244 AL139098.1-201ENST00000407291 389 ntBASIC2.45□□□□□ -2.02
RPA3P35244 FCF1P2-201ENST00000415284 583 ntBASIC2.45□□□□□ -2.02
RPA3P35244 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.45□□□□□ -2.02
RPA3P35244 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.45□□□□□ -2.02
RPA3P35244 AL096803.2-201ENST00000450032 677 ntBASIC2.45□□□□□ -2.02
RPA3P35244 AC010099.1-201ENST00000455434 375 ntBASIC2.45□□□□□ -2.02
RPA3P35244 GTF2IP12-201ENST00000456547 356 ntBASIC2.45□□□□□ -2.02
RPA3P35244 CDC42P1-201ENST00000456658 548 ntBASIC2.45□□□□□ -2.02
RPA3P35244 RPL21P39-201ENST00000463605 483 ntBASIC2.45□□□□□ -2.02
RPA3P35244 AC011979.1-201ENST00000472300 483 ntBASIC2.45□□□□□ -2.02
RPA3P35244 RPL21P93-201ENST00000480465 489 ntBASIC2.45□□□□□ -2.02
RPA3P35244 AC233702.1-201ENST00000482905 502 ntBASIC2.45□□□□□ -2.02
RPA3P35244 AC093591.1-201ENST00000491435 481 ntBASIC2.45□□□□□ -2.02
RPA3P35244 RPL21P16-201ENST00000495531 483 ntBASIC2.45□□□□□ -2.02
RPA3P35244 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RPA3P35244 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RPA3P35244 AC098799.1-201ENST00000504752 800 ntBASIC2.45□□□□□ -2.02
RPA3P35244 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RPA3P35244 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.45□□□□□ -2.02
RPA3P35244 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RPA3P35244 SNORA31.11-201ENST00000516528 139 ntBASIC2.45□□□□□ -2.02
RPA3P35244 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.45□□□□□ -2.02
RPA3P35244 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.45□□□□□ -2.02
RPA3P35244 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.45□□□□□ -2.02
RPA3P35244 AC078814.3-201ENST00000553036 491 ntBASIC2.45□□□□□ -2.02
RPA3P35244 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.45□□□□□ -2.02
RPA3P35244 MTCO1P40-201ENST00000574371 625 ntBASIC2.45□□□□□ -2.02
RPA3P35244 AC061975.8-201ENST00000587058 721 ntBASIC2.45□□□□□ -2.02
RPA3P35244 AC020895.1-201ENST00000595362 272 ntBASIC2.45□□□□□ -2.02
RPA3P35244 AC012443.1-201ENST00000605605 231 ntBASIC2.45□□□□□ -2.02
RPA3P35244 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
RPA3P35244 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.45□□□□□ -2.02
RPA3P35244 AL590396.4-201ENST00000636779 956 ntBASIC2.45□□□□□ -2.02
RPA3P35244 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
RPA3P35244 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.45□□□□□ -2.02
RPA3P35244 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RPA3P35244 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RPA3P35244 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RPA3P35244 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RPA3P35244 RNU6-582P-201ENST00000362989 107 ntBASIC2.44□□□□□ -2.02
RPA3P35244 RNU6-792P-201ENST00000363490 107 ntBASIC2.44□□□□□ -2.02
RPA3P35244 SNORA41-201ENST00000384675 132 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms