Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RNA5SP181-201ENST00000410246 98 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 OR51A3P-201ENST00000413596 924 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 AC080125.1-201ENST00000414888 684 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DMBP28068 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DMBP28068 MTND4LP10-201ENST00000435146 291 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 NDUFB4P6-201ENST00000436819 366 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.95□□□□□ -2.1
HLA-DMBP28068 OR51B8P-201ENST00000449892 769 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 SNRPGP6-201ENST00000451124 220 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 AL109933.2-201ENST00000452651 260 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 RPL31P50-201ENST00000471002 296 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 KC877373.1-201ENST00000479066 408 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 NAMPTP2-201ENST00000505629 1115 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 SNORA31.11-201ENST00000516528 139 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DMBP28068 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DMBP28068 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DMBP28068 MIR3162-201ENST00000581818 82 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 SNORD39.3-201ENST00000584451 71 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 AC008739.2-201ENST00000597006 317 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 AL160237.3-201ENST00000604114 1013 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 AC010738.1-201ENST00000604970 987 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.95□□□□□ -2.1
HLA-DMBP28068 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DMBP28068 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DMBP28068 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DMBP28068 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DMBP28068 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DMBP28068 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DMBP28068 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DMBP28068 RNU6-796P-201ENST00000391086 107 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DMBP28068 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AL031679.1-201ENST00000400616 525 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 RPS4XP8-201ENST00000402039 771 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AL023807.1-201ENST00000407932 359 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AL137014.1-201ENST00000420490 1226 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 RPL7P37-201ENST00000425095 738 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 EZH2P1-201ENST00000431167 291 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 RPS15AP7-201ENST00000439294 405 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC092170.1-201ENST00000440211 356 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC114878.1-201ENST00000441166 358 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 RPL23AP16-201ENST00000441715 421 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC108938.1-201ENST00000451204 136 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 RPS27P27-201ENST00000498779 255 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC006445.2-201ENST00000510061 472 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC008716.1-201ENST00000511084 513 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC096725.1-201ENST00000514266 313 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 RN7SKP40-201ENST00000517211 242 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC124293.1-201ENST00000530034 493 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 ZNF705CP-201ENST00000530515 889 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC067805.1-201ENST00000559344 470 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 ACTR3BP3-201ENST00000565577 979 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 MIR3609-201ENST00000582661 80 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 MIR4672-201ENST00000583126 81 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC012443.1-201ENST00000605605 231 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC092608.2-201ENST00000624427 218 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 PABPC1P9-201ENST00000426076 1612 ntBASIC1.94□□□□□ -2.1
HLA-DMBP28068 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
HLA-DMBP28068 AC008669.1-201ENST00000565823 2178 ntBASIC1.93□□□□□ -2.1
HLA-DMBP28068 MIR449A-201ENST00000362113 91 ntBASIC1.93□□□□□ -2.1
HLA-DMBP28068 SNORD62.1-201ENST00000362541 86 ntBASIC1.93□□□□□ -2.1
HLA-DMBP28068 RNU6-173P-201ENST00000364215 104 ntBASIC1.93□□□□□ -2.1
HLA-DMBP28068 SNORA67.1-201ENST00000364749 141 ntBASIC1.93□□□□□ -2.1
HLA-DMBP28068 MIR34A-201ENST00000385130 110 ntBASIC1.93□□□□□ -2.1
HLA-DMBP28068 AC096533.1-201ENST00000411645 353 ntBASIC1.93□□□□□ -2.1
HLA-DMBP28068 AL133384.1-201ENST00000412744 351 ntBASIC1.93□□□□□ -2.1
HLA-DMBP28068 RPLP0P7-201ENST00000416050 667 ntBASIC1.93□□□□□ -2.1
HLA-DMBP28068 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.93□□□□□ -2.1
HLA-DMBP28068 AC234781.2-201ENST00000426370 994 ntBASIC1.93□□□□□ -2.1
HLA-DMBP28068 AC012497.1-201ENST00000429392 575 ntBASIC1.93□□□□□ -2.1
HLA-DMBP28068 RPL31P54-201ENST00000429803 370 ntBASIC1.93□□□□□ -2.1
HLA-DMBP28068 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DMBP28068 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.93□□□□□ -2.1
HLA-DMBP28068 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DMBP28068 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.93□□□□□ -2.1
HLA-DMBP28068 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.93□□□□□ -2.1
HLA-DMBP28068 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms