Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AC012498.1-201ENST00000424037 437 ntBASIC3.8□□□□□ -1.8
BDNFP23560 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.8□□□□□ -1.8
BDNFP23560 Z82210.1-201ENST00000440037 231 ntBASIC3.8□□□□□ -1.8
BDNFP23560 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.8□□□□□ -1.8
BDNFP23560 AL162389.1-201ENST00000449233 177 ntBASIC3.8□□□□□ -1.8
BDNFP23560 AL009048.1-201ENST00000450437 298 ntBASIC3.8□□□□□ -1.8
BDNFP23560 snoU13.28-201ENST00000459235 104 ntBASIC3.8□□□□□ -1.8
BDNFP23560 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.8□□□□□ -1.8
BDNFP23560 AC110760.3-202ENST00000515177 371 ntBASIC3.8□□□□□ -1.8
BDNFP23560 DUXAP2-201ENST00000519198 589 ntBASIC3.8□□□□□ -1.8
BDNFP23560 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.8□□□□□ -1.8
BDNFP23560 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.8□□□□□ -1.8
BDNFP23560 AC006077.1-201ENST00000604746 343 ntBASIC3.8□□□□□ -1.8
BDNFP23560 AC072039.2-201ENST00000608883 439 ntBASIC3.8□□□□□ -1.8
BDNFP23560 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.8□□□□□ -1.8
BDNFP23560 OR4G3P-201ENST00000633500 913 ntBASIC3.8□□□□□ -1.8
BDNFP23560 AL392088.2-201ENST00000637607 285 ntBASIC3.8□□□□□ -1.8
BDNFP23560 AC058791.1-201ENST00000608412 3198 ntBASIC3.8□□□□□ -1.8
BDNFP23560 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BDNFP23560 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BDNFP23560 NCAPGP1-201ENST00000505112 1814 ntBASIC3.79□□□□□ -1.8
BDNFP23560 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
BDNFP23560 HMGN2P8-201ENST00000391458 268 ntBASIC3.79□□□□□ -1.8
BDNFP23560 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.79□□□□□ -1.8
BDNFP23560 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.79□□□□□ -1.8
BDNFP23560 CYCSP4-201ENST00000429682 331 ntBASIC3.79□□□□□ -1.8
BDNFP23560 BMI1P1-201ENST00000445879 941 ntBASIC3.79□□□□□ -1.8
BDNFP23560 MTCO1P27-201ENST00000448269 226 ntBASIC3.79□□□□□ -1.8
BDNFP23560 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.79□□□□□ -1.8
BDNFP23560 ATG12P2-201ENST00000456830 416 ntBASIC3.79□□□□□ -1.8
BDNFP23560 USP9YP25-201ENST00000457708 443 ntBASIC3.79□□□□□ -1.8
BDNFP23560 RN7SL601P-201ENST00000471221 293 ntBASIC3.79□□□□□ -1.8
BDNFP23560 RPS20P22-201ENST00000473700 357 ntBASIC3.79□□□□□ -1.8
BDNFP23560 RN7SL293P-201ENST00000481765 281 ntBASIC3.79□□□□□ -1.8
BDNFP23560 AC022447.3-201ENST00000506865 495 ntBASIC3.79□□□□□ -1.8
BDNFP23560 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
BDNFP23560 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.79□□□□□ -1.8
BDNFP23560 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.79□□□□□ -1.8
BDNFP23560 NARSP2-201ENST00000518524 679 ntBASIC3.79□□□□□ -1.8
BDNFP23560 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.79□□□□□ -1.8
BDNFP23560 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.79□□□□□ -1.8
BDNFP23560 TRAV28-201ENST00000557548 323 ntBASIC3.79□□□□□ -1.8
BDNFP23560 AC034105.3-201ENST00000565294 442 ntBASIC3.79□□□□□ -1.8
BDNFP23560 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.79□□□□□ -1.8
BDNFP23560 VN1R92P-201ENST00000598511 928 ntBASIC3.79□□□□□ -1.8
BDNFP23560 U73023.1-201ENST00000603134 700 ntBASIC3.79□□□□□ -1.8
BDNFP23560 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.79□□□□□ -1.8
BDNFP23560 AC069200.1-201ENST00000609511 323 ntBASIC3.79□□□□□ -1.8
BDNFP23560 AC019176.2-201ENST00000611579 315 ntBASIC3.79□□□□□ -1.8
BDNFP23560 AL136981.2-201ENST00000617319 734 ntBASIC3.79□□□□□ -1.8
BDNFP23560 AC012314.7-201ENST00000619693 93 ntBASIC3.79□□□□□ -1.8
BDNFP23560 AP000484.1-201ENST00000620067 1252 ntBASIC3.79□□□□□ -1.8
BDNFP23560 U4.6-201ENST00000621618 127 ntBASIC3.79□□□□□ -1.8
BDNFP23560 AC004777.1-201ENST00000624317 287 ntBASIC3.79□□□□□ -1.8
BDNFP23560 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.79□□□□□ -1.8
BDNFP23560 AC099063.3-201ENST00000642066 185 ntBASIC3.79□□□□□ -1.8
BDNFP23560 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
BDNFP23560 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.79□□□□□ -1.8
BDNFP23560 MAPK10-373ENST00000641983 6772 ntBASIC3.79□□□□□ -1.8
BDNFP23560 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
BDNFP23560 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.78□□□□□ -1.8
BDNFP23560 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BDNFP23560 GABRG2-229ENST00000641017 3628 ntBASIC3.78□□□□□ -1.8
BDNFP23560 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
BDNFP23560 FAM133CP-201ENST00000332869 704 ntBASIC3.78□□□□□ -1.8
BDNFP23560 AL672167.1-206ENST00000356293 943 ntBASIC3.78□□□□□ -1.8
BDNFP23560 RNU1-18P-201ENST00000363062 164 ntBASIC3.78□□□□□ -1.8
BDNFP23560 MIR1305-201ENST00000408300 86 ntBASIC3.78□□□□□ -1.8
BDNFP23560 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
BDNFP23560 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.78□□□□□ -1.8
BDNFP23560 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.78□□□□□ -1.8
BDNFP23560 TXNL1P1-201ENST00000429528 554 ntBASIC3.78□□□□□ -1.8
BDNFP23560 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.78□□□□□ -1.8
BDNFP23560 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.78□□□□□ -1.8
BDNFP23560 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.78□□□□□ -1.8
BDNFP23560 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.78□□□□□ -1.8
BDNFP23560 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.78□□□□□ -1.8
BDNFP23560 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.78□□□□□ -1.8
BDNFP23560 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BDNFP23560 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.78□□□□□ -1.8
BDNFP23560 OR5BM1P-201ENST00000512021 366 ntBASIC3.78□□□□□ -1.8
BDNFP23560 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.78□□□□□ -1.8
BDNFP23560 UBTFL10-201ENST00000528532 562 ntBASIC3.78□□□□□ -1.8
BDNFP23560 AC103843.2-201ENST00000530523 682 ntBASIC3.78□□□□□ -1.8
BDNFP23560 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.78□□□□□ -1.8
BDNFP23560 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.78□□□□□ -1.8
BDNFP23560 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.78□□□□□ -1.8
BDNFP23560 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.78□□□□□ -1.8
BDNFP23560 AC002545.1-201ENST00000592511 181 ntBASIC3.78□□□□□ -1.8
BDNFP23560 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.78□□□□□ -1.8
BDNFP23560 AL450489.1-201ENST00000612071 468 ntBASIC3.78□□□□□ -1.8
BDNFP23560 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BDNFP23560 TUG1_2.1-201ENST00000614234 87 ntBASIC3.78□□□□□ -1.8
BDNFP23560 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
BDNFP23560 AC068787.1-201ENST00000623908 691 ntBASIC3.78□□□□□ -1.8
BDNFP23560 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.78□□□□□ -1.8
BDNFP23560 AL732372.2-225ENST00000642124 456 ntBASIC3.78□□□□□ -1.8
BDNFP23560 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BDNFP23560 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BDNFP23560 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms