Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 RNA5SP80-201ENST00000410475 111 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 AC080125.1-201ENST00000414888 684 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 AL096701.2-201ENST00000416920 238 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.84□□□□□ -1.95
CHMP2AO43633 AC246680.2-201ENST00000422106 389 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.84□□□□□ -1.95
CHMP2AO43633 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.84□□□□□ -1.95
CHMP2AO43633 MTCO3P2-201ENST00000457365 171 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 MTND2P31-201ENST00000512602 616 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 RNU6-1095P-201ENST00000516148 108 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 SNORA70.16-201ENST00000516390 95 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 AC123904.3-201ENST00000547218 814 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.84□□□□□ -1.95
CHMP2AO43633 NBEAP1-201ENST00000554452 979 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 AC079148.1-201ENST00000565944 819 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 RPL23AP92-201ENST00000603609 255 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 AC007621.1-201ENST00000604544 437 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 AL022099.1-201ENST00000604551 712 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 AL512506.1-201ENST00000613918 449 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 AC008083.4-201ENST00000615076 444 ntBASIC2.84□□□□□ -1.95
CHMP2AO43633 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.84□□□□□ -1.95
CHMP2AO43633 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.84□□□□□ -1.96
CHMP2AO43633 SGO1P1-201ENST00000603525 1447 ntBASIC2.84□□□□□ -1.96
CHMP2AO43633 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CHMP2AO43633 MIR27B-201ENST00000385129 97 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 SNORD65C-201ENST00000390962 71 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHMP2AO43633 RPL19P1-201ENST00000411635 428 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 RAP1BP1-201ENST00000412709 553 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 BOLA3P4-201ENST00000418151 400 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 AC008173.1-201ENST00000418901 264 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP2AO43633 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.83□□□□□ -1.96
CHMP2AO43633 RPL7P37-201ENST00000425095 738 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CHMP2AO43633 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP2AO43633 AC234775.1-201ENST00000454247 670 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 AC010099.1-201ENST00000455434 375 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 RN7SL499P-201ENST00000481141 276 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP2AO43633 COL6A4P2-205ENST00000509855 506 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 RPL7P20-201ENST00000520308 745 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP2AO43633 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.83□□□□□ -1.96
CHMP2AO43633 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
CHMP2AO43633 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP2AO43633 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP2AO43633 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.83□□□□□ -1.96
CHMP2AO43633 AC023043.3-201ENST00000593113 385 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 AC020895.1-201ENST00000595362 272 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.83□□□□□ -1.96
CHMP2AO43633 AC098483.2-201ENST00000603158 454 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 AC026741.1-201ENST00000605892 482 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 AL138880.2-201ENST00000616214 239 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 LRRC77P-213ENST00000637727 880 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 ZNF663P-202ENST00000641770 1131 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 AL355596.1-201ENST00000565399 3996 ntBASIC2.83□□□□□ -1.96
CHMP2AO43633 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHMP2AO43633 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CHMP2AO43633 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CHMP2AO43633 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHMP2AO43633 RNU4-82P-201ENST00000362443 140 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 RNU6-173P-201ENST00000364215 104 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 RNU6-115P-201ENST00000364310 107 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 MIR518C-201ENST00000384822 101 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 MIR16-1-201ENST00000385271 89 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 AC009963.1-201ENST00000417265 157 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 AL513175.2-201ENST00000422071 443 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 AL121882.1-201ENST00000422893 417 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 FO393414.1-201ENST00000428697 1184 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 AC005345.1-201ENST00000431868 217 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.82□□□□□ -1.96
CHMP2AO43633 LSM1P1-201ENST00000438629 273 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 AC017099.1-201ENST00000448261 1028 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.82□□□□□ -1.96
CHMP2AO43633 AC008571.1-201ENST00000467232 300 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 RPS27AP9-201ENST00000477681 438 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 RPL21P47-201ENST00000483696 477 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 RPL9P33-201ENST00000484311 566 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 AC087272.1-201ENST00000523624 533 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.82□□□□□ -1.96
CHMP2AO43633 AADACP1-206ENST00000561502 1193 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 AC009097.3-201ENST00000563557 1018 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CHMP2AO43633 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.82□□□□□ -1.96
CHMP2AO43633 U73023.1-201ENST00000603134 700 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.82□□□□□ -1.96
CHMP2AO43633 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CHMP2AO43633 AC073592.7-201ENST00000623659 507 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 AC008432.1-201ENST00000615912 1320 ntBASIC2.82□□□□□ -1.96
CHMP2AO43633 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CHMP2AO43633 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
CHMP2AO43633 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.81□□□□□ -1.96
CHMP2AO43633 RNU6-619P-201ENST00000365146 108 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 FO393413.1-201ENST00000402892 195 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 AL136372.1-201ENST00000403060 228 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 AL137014.1-201ENST00000420490 1226 ntBASIC2.81□□□□□ -1.96
CHMP2AO43633 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.81□□□□□ -1.96
CHMP2AO43633 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms