Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.62□□□□□ -1.67
FOXN1O15353 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN1O15353 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
FOXN1O15353 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
FOXN1O15353 RNU6-619P-201ENST00000365146 108 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 RNU6-98P-201ENST00000384173 107 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 MIR1251-201ENST00000408552 70 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN1O15353 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.62□□□□□ -1.67
FOXN1O15353 AC004552.1-201ENST00000419089 348 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 ZNF90P2-204ENST00000419323 1075 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN1O15353 AC005326.1-201ENST00000429197 123 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AL358472.1-201ENST00000431295 329 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN1O15353 PGBD4P3-201ENST00000440731 581 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN1O15353 AC010307.1-201ENST00000467206 836 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 RPS26P3-201ENST00000470205 348 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AC090543.2-201ENST00000483963 348 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AC004057.1-201ENST00000485827 348 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 RPL31P61-201ENST00000496160 376 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN1O15353 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN1O15353 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN1O15353 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.62□□□□□ -1.67
FOXN1O15353 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN1O15353 FGF7P4-201ENST00000509595 295 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN1O15353 RNU6-327P-201ENST00000516270 127 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 Y_RNA.693-201ENST00000516641 110 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 IGKV2-38-201ENST00000517443 247 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN1O15353 AC018442.3-201ENST00000523025 183 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN1O15353 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.62□□□□□ -1.67
FOXN1O15353 AC093027.1-201ENST00000546698 429 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXN1O15353 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.62□□□□□ -1.67
FOXN1O15353 AL359212.1-201ENST00000556608 614 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.62□□□□□ -1.67
FOXN1O15353 AC138915.2-201ENST00000569776 97 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.62□□□□□ -1.67
FOXN1O15353 AC015917.1-201ENST00000579654 510 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 MIR5684-201ENST00000585074 65 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXN1O15353 AC112191.3-201ENST00000604371 277 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AC009237.17-201ENST00000618111 748 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.62□□□□□ -1.67
FOXN1O15353 AL773545.4-201ENST00000637262 310 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AL513478.4-201ENST00000641636 310 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN1O15353 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
FOXN1O15353 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
FOXN1O15353 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
FOXN1O15353 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN1O15353 KPNA2P2-201ENST00000419546 1489 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN1O15353 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
FOXN1O15353 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN1O15353 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.61□□□□□ -1.67
FOXN1O15353 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.61□□□□□ -1.67
FOXN1O15353 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN1O15353 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
FOXN1O15353 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN1O15353 AC093775.1-201ENST00000624154 1868 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN1O15353 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN1O15353 SNORA60-201ENST00000362396 134 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 RNU6-1066P-201ENST00000363573 105 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 RNA5SP51-201ENST00000364750 119 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 Y_RNA.419-201ENST00000384041 102 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXN1O15353 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN1O15353 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.61□□□□□ -1.67
FOXN1O15353 SDCBPP1-201ENST00000440192 890 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 RABEPKP1-201ENST00000440529 1026 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 YWHAQP9-201ENST00000445891 512 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 HMGB3P22-202ENST00000451823 572 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
FOXN1O15353 MTCO3P20-201ENST00000454926 688 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 BX248409.1-201ENST00000455497 255 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 Y_RNA.638-201ENST00000459374 113 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 RN7SL271P-201ENST00000487601 295 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 AC096576.1-201ENST00000489014 359 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 AC020893.1-201ENST00000502452 580 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN1O15353 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN1O15353 RNU7-143P-201ENST00000516781 65 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 RNA5SP179-201ENST00000517284 121 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 MYL12AP1-201ENST00000518490 515 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 AC027309.2-201ENST00000520566 192 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.61□□□□□ -1.67
FOXN1O15353 AC022690.1-201ENST00000526681 550 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 AP001189.2-201ENST00000527320 189 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 AC022878.1-201ENST00000530684 149 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 AP002812.4-201ENST00000532139 286 ntBASIC4.61□□□□□ -1.67
FOXN1O15353 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.61□□□□□ -1.67
FOXN1O15353 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.61□□□□□ -1.67
FOXN1O15353 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms