Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RGPD3A6NKT7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.32□□□□□ -2.04
RGPD3A6NKT7 AL391987.6-201ENST00000305671 199 ntBASIC2.31□□□□□ -2.04
RGPD3A6NKT7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 MIR5089-201ENST00000580047 84 ntBASIC2.31□□□□□ -2.04
RGPD3A6NKT7 AC011890.2-201ENST00000613393 294 ntBASIC2.31□□□□□ -2.04
RGPD3A6NKT7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.31□□□□□ -2.04
RGPD3A6NKT7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 RNA5SP338-201ENST00000410495 85 ntBASIC2.31□□□□□ -2.04
RGPD3A6NKT7 FNDC3CP-201ENST00000420795 1155 ntBASIC2.31□□□□□ -2.04
RGPD3A6NKT7 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 AC009238.1-201ENST00000442165 424 ntBASIC2.31□□□□□ -2.04
RGPD3A6NKT7 AC009237.6-201ENST00000446969 424 ntBASIC2.31□□□□□ -2.04
RGPD3A6NKT7 AC239860.2-201ENST00000525886 270 ntBASIC2.31□□□□□ -2.04
RGPD3A6NKT7 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RGPD3A6NKT7 AL353748.2-201ENST00000622148 471 ntBASIC2.31□□□□□ -2.04
RGPD3A6NKT7 MTND4P34-201ENST00000572715 1371 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.3□□□□□ -2.04
RGPD3A6NKT7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
RGPD3A6NKT7 AL353746.1-201ENST00000566293 6881 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 UBE2L2-201ENST00000254302 429 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 MIR613-201ENST00000385248 95 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RGPD3A6NKT7 RPL23AP7-203ENST00000449021 469 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 RNU1-123P-201ENST00000458950 160 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 AC080013.2-201ENST00000460866 323 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 AC073901.1-201ENST00000462471 408 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 AC079804.2-201ENST00000490376 200 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 AC104986.1-201ENST00000517978 436 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 HMGN1P28-201ENST00000521340 364 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.3□□□□□ -2.04
RGPD3A6NKT7 AC103810.1-201ENST00000579873 453 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.3□□□□□ -2.04
RGPD3A6NKT7 AC012321.1-201ENST00000561622 1588 ntBASIC2.3□□□□□ -2.04
RGPD3A6NKT7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.3□□□□□ -2.04
RGPD3A6NKT7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
RGPD3A6NKT7 AL035405.1-201ENST00000400795 710 ntBASIC2.29□□□□□ -2.04
RGPD3A6NKT7 AL513331.1-201ENST00000411908 397 ntBASIC2.29□□□□□ -2.04
RGPD3A6NKT7 EIF1AXP1-201ENST00000419267 435 ntBASIC2.29□□□□□ -2.04
RGPD3A6NKT7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RGPD3A6NKT7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.29□□□□□ -2.04
RGPD3A6NKT7 RPS15AP17-201ENST00000470598 390 ntBASIC2.29□□□□□ -2.04
RGPD3A6NKT7 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RGPD3A6NKT7 AC023050.1-201ENST00000498198 304 ntBASIC2.29□□□□□ -2.04
RGPD3A6NKT7 RAC1P5-201ENST00000512182 576 ntBASIC2.29□□□□□ -2.04
RGPD3A6NKT7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RGPD3A6NKT7 RNU6-347P-201ENST00000516658 105 ntBASIC2.29□□□□□ -2.04
RGPD3A6NKT7 PRELID2P1-201ENST00000552837 301 ntBASIC2.29□□□□□ -2.04
RGPD3A6NKT7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.29□□□□□ -2.04
RGPD3A6NKT7 AC009314.1-201ENST00000603871 304 ntBASIC2.29□□□□□ -2.04
RGPD3A6NKT7 RNA5SP108-201ENST00000605921 117 ntBASIC2.29□□□□□ -2.04
RGPD3A6NKT7 MIR502-201ENST00000606349 86 ntBASIC2.29□□□□□ -2.04
RGPD3A6NKT7 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.29□□□□□ -2.04
RGPD3A6NKT7 AC233981.2-201ENST00000611524 1614 ntBASIC2.29□□□□□ -2.04
RGPD3A6NKT7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RGPD3A6NKT7 AP000567.1-201ENST00000406413 156 ntBASIC2.28□□□□□ -2.04
RGPD3A6NKT7 AC234782.4-201ENST00000417646 1048 ntBASIC2.28□□□□□ -2.04
RGPD3A6NKT7 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.28□□□□□ -2.04
RGPD3A6NKT7 PPP1R2P5-201ENST00000457256 603 ntBASIC2.28□□□□□ -2.04
RGPD3A6NKT7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.28□□□□□ -2.04
RGPD3A6NKT7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.28□□□□□ -2.04
RGPD3A6NKT7 MIR4474-201ENST00000579189 78 ntBASIC2.28□□□□□ -2.04
RGPD3A6NKT7 VN1R74P-201ENST00000613259 503 ntBASIC2.28□□□□□ -2.04
RGPD3A6NKT7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.28□□□□□ -2.04
RGPD3A6NKT7 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.28□□□□□ -2.04
RGPD3A6NKT7 RNU1-101P-201ENST00000391171 127 ntBASIC2.28□□□□□ -2.04
RGPD3A6NKT7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.28□□□□□ -2.04
RGPD3A6NKT7 MTND2P16-201ENST00000419987 799 ntBASIC2.28□□□□□ -2.04
RGPD3A6NKT7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.28□□□□□ -2.04
RGPD3A6NKT7 AL121594.1-201ENST00000475906 575 ntBASIC2.28□□□□□ -2.04
RGPD3A6NKT7 RN7SKP5-201ENST00000517045 272 ntBASIC2.28□□□□□ -2.04
RGPD3A6NKT7 RN7SL622P-201ENST00000585292 275 ntBASIC2.28□□□□□ -2.04
RGPD3A6NKT7 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
RGPD3A6NKT7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RGPD3A6NKT7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
RGPD3A6NKT7 RNU6-225P-201ENST00000384613 103 ntBASIC2.27□□□□□ -2.05
RGPD3A6NKT7 AC240504.1-201ENST00000395709 845 ntBASIC2.27□□□□□ -2.05
RGPD3A6NKT7 USP9YP27-201ENST00000418455 438 ntBASIC2.27□□□□□ -2.05
RGPD3A6NKT7 HMGN2P20-201ENST00000437531 273 ntBASIC2.27□□□□□ -2.05
RGPD3A6NKT7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.27□□□□□ -2.05
RGPD3A6NKT7 RNU6-717P-201ENST00000459076 104 ntBASIC2.27□□□□□ -2.05
RGPD3A6NKT7 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.27□□□□□ -2.05
RGPD3A6NKT7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.27□□□□□ -2.05
RGPD3A6NKT7 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.27□□□□□ -2.05
RGPD3A6NKT7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RGPD3A6NKT7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
RGPD3A6NKT7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RGPD3A6NKT7 RNU6-1027P-201ENST00000383998 107 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms