Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC022861.1-201ENST00000522981 663 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 HSPA8P13-201ENST00000523715 472 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AP002453.2-201ENST00000533503 320 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC068587.4-201ENST00000533893 186 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 MIR4528-201ENST00000577763 90 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 MIR4307-201ENST00000582802 84 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 YWHAQP7-201ENST00000603536 658 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AC098614.4-201ENST00000607601 462 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 AL159169.3-201ENST00000608871 561 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 CYP3A51P-201ENST00000633513 256 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 CRYM-AS1-204ENST00000637983 556 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 GABPAP-201ENST00000419271 1356 ntBASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SMARCAL1Q9NZC9 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 RNU6-297P-201ENST00000384636 107 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 RNU2-37P-201ENST00000410695 177 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 RN7SKP53-201ENST00000411337 315 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 RPL17P36-201ENST00000420302 549 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 RPL23AP74-201ENST00000437246 471 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 RPL23AP62-201ENST00000463396 453 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 SRRM1P2-201ENST00000464531 1192 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC096751.1-202ENST00000502691 1067 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC093767.1-201ENST00000504523 156 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 DUXAP2-201ENST00000519198 589 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 COX6CP8-201ENST00000522620 226 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 MTND4LP18-201ENST00000526864 291 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AP004242.1-201ENST00000533701 349 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC092470.1-201ENST00000546187 132 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC027807.1-201ENST00000559921 996 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 BBIP1P1-201ENST00000602999 279 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC025588.3-201ENST00000604182 274 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC112187.2-201ENST00000604345 283 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 BCRP9-201ENST00000605312 388 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 NDUFA8P1-201ENST00000605525 367 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC104010.1-201ENST00000616889 150 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC009318.4-201ENST00000620496 486 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AL603839.4-201ENST00000624658 1005 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC112200.1-201ENST00000625015 234 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC007823.1-201ENST00000569932 1566 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC006378.2-201ENST00000623178 2476 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AL513302.2-201ENST00000562313 1842 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AC092447.7-201ENST00000422212 1621 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 AL122126.1-201ENST00000546905 1318 ntBASIC3.7□□□□□ -1.82
SMARCAL1Q9NZC9 USP8P1-201ENST00000494673 3183 ntBASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 RNU6-517P-201ENST00000384362 110 ntBASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 RNU6-769P-201ENST00000384407 104 ntBASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 Y_RNA.516-201ENST00000384541 124 ntBASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 SNORA40.3-201ENST00000390964 122 ntBASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 BTBD10P2-201ENST00000404779 676 ntBASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 RN7SKP266-201ENST00000410232 287 ntBASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 HMGN1P14-201ENST00000412459 517 ntBASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 RPL21P32-201ENST00000419877 477 ntBASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 MRPS18BP2-201ENST00000434310 759 ntBASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 RSU1P2-202ENST00000437884 485 ntBASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.69□□□□□ -1.82
SMARCAL1Q9NZC9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms