Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP88Q99567 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.58□□□□□ -1.68
NUP88Q99567 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP88Q99567 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.58□□□□□ -1.68
NUP88Q99567 AC087499.8-201ENST00000578406 226 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 NRBF2P1-201ENST00000587407 859 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 BNIP3P33-201ENST00000598912 569 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 AC108747.1-201ENST00000609508 535 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 BX664608.1-201ENST00000610519 487 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 AL133173.2-201ENST00000614270 90 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 AC012150.2-201ENST00000621300 544 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 AC009268.2-201ENST00000621925 457 ntBASIC4.58□□□□□ -1.68
NUP88Q99567 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NUP88Q99567 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUP88Q99567 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.58□□□□□ -1.68
NUP88Q99567 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP88Q99567 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP88Q99567 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP88Q99567 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP88Q99567 SNORA71.3-201ENST00000362582 128 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 U8.3-201ENST00000363321 132 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 RNY4P16-201ENST00000364768 94 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 RNA5SP235-201ENST00000365411 114 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.57□□□□□ -1.68
NUP88Q99567 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
NUP88Q99567 RNU6-259P-201ENST00000383999 107 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 RNU6-432P-201ENST00000384196 109 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 SNORA3C-201ENST00000408792 125 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 OR1AA1P-201ENST00000419597 916 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 AC019097.1-201ENST00000424783 735 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.57□□□□□ -1.68
NUP88Q99567 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP88Q99567 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP88Q99567 RANP8-201ENST00000444720 713 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 AL133547.1-201ENST00000448546 220 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP88Q99567 NDUFS5P3-201ENST00000450668 321 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.57□□□□□ -1.68
NUP88Q99567 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP88Q99567 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.57□□□□□ -1.68
NUP88Q99567 RPS26P15-201ENST00000488067 348 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.57□□□□□ -1.68
NUP88Q99567 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.57□□□□□ -1.68
NUP88Q99567 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP88Q99567 AC087369.1-201ENST00000520775 996 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP88Q99567 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUP88Q99567 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP88Q99567 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP88Q99567 AC022968.1-201ENST00000567372 442 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
NUP88Q99567 SNRPGP15-201ENST00000600149 222 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 AC007038.2-201ENST00000608095 740 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 AC004908.2-201ENST00000609090 574 ntBASIC4.57□□□□□ -1.68
NUP88Q99567 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP88Q99567 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.57□□□□□ -1.68
NUP88Q99567 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
NUP88Q99567 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.57□□□□□ -1.68
NUP88Q99567 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NUP88Q99567 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
NUP88Q99567 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP88Q99567 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
NUP88Q99567 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP88Q99567 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP88Q99567 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
NUP88Q99567 RNU6-335P-201ENST00000364563 113 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NUP88Q99567 RNU6-278P-201ENST00000390945 109 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 Y_RNA.582-201ENST00000391023 95 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP88Q99567 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP88Q99567 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
NUP88Q99567 RAD23BP2-201ENST00000416003 1207 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.56□□□□□ -1.68
NUP88Q99567 USP9YP36-201ENST00000424581 829 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 OR2B8P-201ENST00000432841 938 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP88Q99567 UBDP1-202ENST00000457888 382 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.56□□□□□ -1.68
NUP88Q99567 SRRM1P2-201ENST00000464531 1192 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.56□□□□□ -1.68
NUP88Q99567 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.56□□□□□ -1.68
NUP88Q99567 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
NUP88Q99567 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP88Q99567 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP88Q99567 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.56□□□□□ -1.68
NUP88Q99567 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.56□□□□□ -1.68
NUP88Q99567 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.56□□□□□ -1.68
NUP88Q99567 AL391813.2-201ENST00000609113 322 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 AC068792.1-201ENST00000621354 417 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 AC103858.2-201ENST00000621471 543 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 AC138649.3-201ENST00000622154 254 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 MIR4727-201ENST00000622232 55 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 AL732618.1-201ENST00000623251 301 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 AC091953.2-201ENST00000623979 160 ntBASIC4.56□□□□□ -1.68
NUP88Q99567 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP88Q99567 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
NUP88Q99567 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NUP88Q99567 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms