Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 AL133241.1-201ENST00000556832 487 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 TVP23BP1-201ENST00000557500 617 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC007224.1-201ENST00000564410 144 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC107954.1-201ENST00000565906 727 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AL669831.4-202ENST00000590817 238 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC007687.1-201ENST00000602704 304 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 MIR486-1-201ENST00000612171 68 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC090970.3-201ENST00000612566 866 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AL445567.2-201ENST00000618935 498 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC112204.3-201ENST00000623822 332 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 RPS4XP5-202ENST00000449995 1334 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS50Q96JG6 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS50Q96JG6 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 MTCO1P24-201ENST00000515438 1558 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
VPS50Q96JG6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
VPS50Q96JG6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VPS50Q96JG6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS50Q96JG6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC008033.1-201ENST00000216407 1162 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS50Q96JG6 MIR331-201ENST00000362302 94 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 RNY4P16-201ENST00000364768 94 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 RNU6-282P-201ENST00000365357 103 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS50Q96JG6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS50Q96JG6 U3.20-201ENST00000390909 217 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 RNU6-780P-201ENST00000391030 104 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 SNORD115-47-201ENST00000391226 86 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 BTF3P7-201ENST00000407097 488 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC127391.1-201ENST00000411737 98 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 RPL17P36-201ENST00000420302 549 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC069157.1-201ENST00000421749 137 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC007283.2-201ENST00000424739 197 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC017083.1-201ENST00000428093 483 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC004975.1-201ENST00000428733 208 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS50Q96JG6 RPL23AP46-201ENST00000438548 490 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC108734.1-201ENST00000439549 399 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 ELF2P3-201ENST00000445099 1506 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 AL590399.6-201ENST00000446396 307 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 C1DP4-201ENST00000455429 424 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC078918.1-201ENST00000498515 228 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 RNU2-58P-201ENST00000516403 183 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC011468.4-201ENST00000603942 409 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC011816.2-201ENST00000607089 556 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 AL133173.2-201ENST00000614270 90 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 AL021997.2-201ENST00000615674 271 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 U4.5-201ENST00000617137 123 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 MIR8059-201ENST00000620427 81 ntBASIC4.08□□□□□ -1.76
VPS50Q96JG6 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS50Q96JG6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS50Q96JG6 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
VPS50Q96JG6 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS50Q96JG6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS50Q96JG6 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS50Q96JG6 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS50Q96JG6 RNU6-359P-201ENST00000365466 108 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 RPL23AP32-201ENST00000395315 459 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 MRPL42P2-201ENST00000403169 426 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 MTND3P17-201ENST00000416968 344 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AL161631.1-201ENST00000417933 486 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 PIGFP2-201ENST00000421400 651 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 ISCA1P1-201ENST00000426679 387 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 MTND3P21-201ENST00000433774 331 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 FTH1P1-201ENST00000437933 532 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 RBMX2P4-201ENST00000441256 376 ntBASIC4.07□□□□□ -1.76
VPS50Q96JG6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.07□□□□□ -1.76
VPS50Q96JG6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms