Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MTCYBP17-201ENST00000503579 789 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 RNA5SP309-201ENST00000516670 106 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 MAGOH2P-202ENST00000584384 429 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 uc_338.5-201ENST00000611839 155 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 AC010872.1-201ENST00000624225 675 ntBASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VPS13DQ5THJ4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 SNORD114-22-201ENST00000365423 72 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 Y_RNA.374-201ENST00000365606 101 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 RNU2-37P-201ENST00000410695 177 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 NEK4P1-201ENST00000433383 879 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AL590664.1-201ENST00000448065 339 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AC135721.1-201ENST00000497954 479 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AC104986.1-201ENST00000517978 436 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 SEPT7P7-201ENST00000420492 1301 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 VTRNA1-1-201ENST00000363120 99 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AL121972.1-201ENST00000402023 252 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AC012150.2-201ENST00000621300 544 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 BTBD10P2-201ENST00000404779 676 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 MIR4421-201ENST00000578133 69 ntBASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
VPS13DQ5THJ4 TAS2R15P-201ENST00000390674 928 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 RNU6-174P-201ENST00000410406 106 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 USP9YP10-201ENST00000454868 628 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 SETP2-201ENST00000553886 926 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AC008015.1-201ENST00000555505 465 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AC107021.2-201ENST00000567714 2095 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 RNY1-201ENST00000364228 113 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 RPL12P25-201ENST00000455592 494 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 IGKV2D-36-201ENST00000518643 226 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AC004943.3-201ENST00000624116 600 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 RPL17P12-201ENST00000413391 526 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AC073310.1-201ENST00000423226 1033 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 OR4K11P-201ENST00000431829 904 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AL109741.2-201ENST00000455561 343 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AC092798.1-201ENST00000458542 409 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AC007256.1-201ENST00000392253 2765 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 SNORA67.5-201ENST00000391036 107 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AC109583.1-201ENST00000432156 268 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 AC104564.1-201ENST00000493028 407 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 ARL4AP2-201ENST00000507378 601 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 OR8X1P-201ENST00000534542 869 ntBASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
VPS13DQ5THJ4 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 RNA5SP325-201ENST00000363756 130 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 MIR4446-201ENST00000578505 67 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 AL391987.6-201ENST00000305671 199 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 RNU6-60P-201ENST00000364792 103 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 AC019129.1-201ENST00000403786 261 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 USP9YP27-201ENST00000418455 438 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 AC007395.1-201ENST00000451333 677 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 AC006390.1-201ENST00000508068 283 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 BX649567.1-201ENST00000642071 1134 ntBASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
VPS13DQ5THJ4 RPL23AP39-201ENST00000415533 405 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms