Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.1□□□□□ -1.91
PTPN6P29350 AC090615.1-201ENST00000577519 154 ntBASIC3.1□□□□□ -1.91
PTPN6P29350 OR4K8P-201ENST00000578842 1048 ntBASIC3.1□□□□□ -1.91
PTPN6P29350 MTCO2P2-201ENST00000591258 225 ntBASIC3.1□□□□□ -1.91
PTPN6P29350 AL390208.1-201ENST00000605885 644 ntBASIC3.1□□□□□ -1.91
PTPN6P29350 DUXAP10-204ENST00000612052 616 ntBASIC3.1□□□□□ -1.91
PTPN6P29350 AL596245.1-201ENST00000618994 362 ntBASIC3.1□□□□□ -1.91
PTPN6P29350 AC116618.1-201ENST00000634617 774 ntBASIC3.1□□□□□ -1.91
PTPN6P29350 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN6P29350 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN6P29350 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PTPN6P29350 MTND5P24-201ENST00000438892 1767 ntBASIC3.1□□□□□ -1.91
PTPN6P29350 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
PTPN6P29350 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN6P29350 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN6P29350 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN6P29350 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN6P29350 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.09□□□□□ -1.91
PTPN6P29350 TAB3P1-202ENST00000452645 1634 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 U3.6-201ENST00000363622 211 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 Y_RNA.192-201ENST00000363977 102 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN6P29350 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN6P29350 RNU6-1027P-201ENST00000383998 107 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 MTCO2P8-201ENST00000412213 658 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 BX323014.1-201ENST00000412876 237 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PTPN6P29350 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN6P29350 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN6P29350 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN6P29350 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.09□□□□□ -1.91
PTPN6P29350 MTCYBP45-201ENST00000435243 565 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN6P29350 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN6P29350 RPL21P134-201ENST00000453468 483 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 RNU7-136P-201ENST00000458819 69 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN6P29350 DSTNP2-201ENST00000504533 515 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 HSPD1P15-201ENST00000505573 1122 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN6P29350 AC116353.3-201ENST00000511215 249 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 SCARNA1-201ENST00000517138 166 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN6P29350 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN6P29350 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.09□□□□□ -1.91
PTPN6P29350 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN6P29350 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.09□□□□□ -1.91
PTPN6P29350 MTCO3P24-201ENST00000572729 782 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 AL031985.2-201ENST00000600955 480 ntBASIC3.09□□□□□ -1.91
PTPN6P29350 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN6P29350 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN6P29350 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN6P29350 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN6P29350 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN6P29350 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.09□□□□□ -1.91
PTPN6P29350 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
PTPN6P29350 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.09□□□□□ -1.92
PTPN6P29350 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PTPN6P29350 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.09□□□□□ -1.92
PTPN6P29350 AC005539.1-201ENST00000443768 1479 ntBASIC3.09□□□□□ -1.92
PTPN6P29350 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.09□□□□□ -1.92
PTPN6P29350 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PTPN6P29350 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN6P29350 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
PTPN6P29350 FAM35CP-201ENST00000554755 2470 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN6P29350 RNU6-799P-201ENST00000363567 107 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 RNU6-636P-201ENST00000384598 107 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 MIR135A2-201ENST00000384854 100 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PTPN6P29350 MIR1284-201ENST00000408337 120 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 TPMTP2-201ENST00000414372 726 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 AL158156.1-201ENST00000422509 473 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPN6P29350 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPN6P29350 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPN6P29350 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 OR2AS1P-201ENST00000427827 319 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.08□□□□□ -1.92
PTPN6P29350 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPN6P29350 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.08□□□□□ -1.92
PTPN6P29350 AL009048.1-201ENST00000450437 298 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 AC093392.2-201ENST00000450682 337 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 RN7SL601P-201ENST00000471221 293 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN6P29350 KCTD9P5-201ENST00000504141 1170 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 VN1R104P-201ENST00000505115 1009 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 AC026427.2-201ENST00000506228 536 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 SNORA74D-201ENST00000516404 141 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPN6P29350 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.08□□□□□ -1.92
PTPN6P29350 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
PTPN6P29350 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.08□□□□□ -1.92
PTPN6P29350 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.08□□□□□ -1.92
PTPN6P29350 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PTPN6P29350 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPN6P29350 OR4H12P-201ENST00000556269 907 ntBASIC3.08□□□□□ -1.92
PTPN6P29350 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.08□□□□□ -1.92
PTPN6P29350 AC015917.1-201ENST00000579654 510 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms