Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 GDI2P2-201ENST00000445131 608 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 MRPS31P2-201ENST00000451581 518 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 BTF3P5-201ENST00000457252 467 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC004801.2-202ENST00000463559 283 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 PTGES3P3-201ENST00000511479 482 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 RNU1-45P-201ENST00000517191 141 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AP002748.2-201ENST00000528671 348 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC022880.1-201ENST00000534017 973 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 MTND1P15-201ENST00000579262 949 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC068790.6-201ENST00000602558 258 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC068790.2-201ENST00000602601 557 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 RPL23AP92-201ENST00000603609 255 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC112230.1-201ENST00000604342 547 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AL390208.1-201ENST00000605885 644 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC104073.3-201ENST00000610942 955 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AL391261.4-201ENST00000616012 481 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 AC022149.2-201ENST00000621061 203 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.7□□□□□ -1.82
PCDH9Q9HC56 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
PCDH9Q9HC56 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 RNU6-356P-201ENST00000384140 107 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 MIR554-201ENST00000384874 96 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 MTND4LP20-201ENST00000402379 270 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 MTCO1P17-201ENST00000411522 491 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 MTCO1P21-201ENST00000416634 589 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC245054.1-201ENST00000420944 258 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 MTCYBP45-201ENST00000435243 565 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 HMGB1P15-201ENST00000453854 435 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC007537.2-201ENST00000472093 511 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 ACTR3P3-201ENST00000480448 893 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC023424.2-201ENST00000493479 777 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC022447.3-201ENST00000506865 495 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC005921.1-201ENST00000510589 286 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 RNU2-27P-201ENST00000516185 142 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AP002453.2-201ENST00000533503 320 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 TGIF1P1-201ENST00000558095 802 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 ZNF192P1-203ENST00000565888 810 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC053481.3-201ENST00000577881 843 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 MIR4307-201ENST00000582802 84 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC006130.2-201ENST00000586202 326 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 SEPT7P9-203ENST00000604116 343 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC112187.2-201ENST00000604345 283 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AL365503.1-201ENST00000605247 905 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AL109618.2-201ENST00000605527 211 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC013562.2-201ENST00000611632 603 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AL121772.2-201ENST00000614331 297 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AL357080.1-201ENST00000617394 239 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AC073968.1-201ENST00000618594 637 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 AL445264.1-201ENST00000621719 171 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 U6.98-201ENST00000637157 84 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 PWAR6-201ENST00000552334 4618 ntBASIC3.69□□□□□ -1.82
PCDH9Q9HC56 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PCDH9Q9HC56 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AP001148.1-201ENST00000624124 2359 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 NUP58P1-201ENST00000502546 1738 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 PRO1804-201ENST00000623780 2050 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 RNU4-91P-201ENST00000364778 135 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 RNU6-744P-201ENST00000365557 107 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 RNU6-1316P-201ENST00000384242 108 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 Y_RNA.517-201ENST00000384551 106 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 HSPE1P26-201ENST00000405341 275 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 RN7SKP266-201ENST00000410232 287 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 RNU2-15P-201ENST00000410692 191 ntBASIC3.68□□□□□ -1.82
PCDH9Q9HC56 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.68□□□□□ -1.82
PCDH9Q9HC56 RPL31P2-201ENST00000413849 377 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms