Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC024560.2-201ENST00000507981 1497 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 RNA5SP52-201ENST00000362448 134 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 RNA5SP119-201ENST00000362715 117 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 SNORA5A-201ENST00000384111 134 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 MIR19A-201ENST00000384878 82 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 MIR708-201ENST00000390708 88 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 SNORA3.3-201ENST00000408712 125 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 EI24P1-201ENST00000416584 867 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 CCDC58P2-201ENST00000417131 366 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC010975.2-201ENST00000427781 588 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 RPL23AP83-201ENST00000434984 473 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 TPT1P14-201ENST00000448018 505 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 RAD23BP3-201ENST00000454157 1152 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 MTCYBP1-201ENST00000454315 1119 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AP000873.1-201ENST00000463987 400 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 HMGB1P22-201ENST00000505315 124 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 Y_RNA.672-201ENST00000516289 104 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 RNU1-95P-201ENST00000516357 160 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 RNU1-128P-201ENST00000516704 160 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC103783.1-201ENST00000520506 373 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AP003033.1-201ENST00000527244 415 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AP003392.2-201ENST00000527269 208 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 OR4T1P-201ENST00000554933 911 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AL121834.1-201ENST00000572284 509 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 MIR3682-201ENST00000581338 84 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 MIR3118-1-201ENST00000581787 76 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC121334.2-201ENST00000605387 271 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC103710.1-201ENST00000610003 901 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC019176.2-201ENST00000611579 315 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC087241.4-201ENST00000612441 480 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC005332.10-201ENST00000612725 619 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC009268.2-201ENST00000621925 457 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AL359740.1-201ENST00000624340 592 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AL159972.1-201ENST00000625150 448 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 PISRT1-201ENST00000626175 531 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 AC244258.1-201ENST00000637553 1071 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 FARSBP1-201ENST00000435808 1778 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
HMGB4Q8WW32 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 MTND5P29-201ENST00000458676 1807 ntBASIC3.98□□□□□ -1.77
HMGB4Q8WW32 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 MTCO1P9-201ENST00000505577 1534 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AL161912.2-201ENST00000565707 3007 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC092447.7-201ENST00000422212 1621 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 GNG5P1-201ENST00000255500 204 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 RNU1-108P-201ENST00000362556 161 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 RNA5SP235-201ENST00000365411 114 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 RNU6-1042P-201ENST00000384204 107 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC068533.1-201ENST00000418542 415 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC073614.1-201ENST00000438690 650 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC069285.2-201ENST00000440210 275 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 ATP5C1P1-201ENST00000441945 895 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC093278.1-201ENST00000494700 600 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC006499.6-201ENST00000511169 607 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 RNU6-720P-201ENST00000516363 108 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 RNU6-798P-201ENST00000516912 103 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 SNORA31.20-201ENST00000517111 133 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC107934.1-201ENST00000522215 217 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 MTCYBP41-201ENST00000528913 1123 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC009063.1-201ENST00000563342 702 ntBASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.97□□□□□ -1.77
HMGB4Q8WW32 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms