Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC092435.3-201ENST00000565538 3654 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AL138713.1-201ENST00000624026 2130 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC025750.1-201ENST00000399891 379 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 RPL21P65-201ENST00000406094 466 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 TXNP7-201ENST00000406296 293 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 TPMTP3-201ENST00000411928 735 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 RPS15AP6-201ENST00000420703 385 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC012498.1-201ENST00000424037 437 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AP000542.1-201ENST00000448473 371 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 MTND1P9-201ENST00000453775 944 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 RPS20P20-201ENST00000460498 340 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC233702.1-201ENST00000482905 502 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC034222.1-201ENST00000494052 532 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC135721.1-201ENST00000497954 479 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 DSTNP2-201ENST00000504533 515 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 RNA5SP216-201ENST00000516111 123 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 SNORA31.26-201ENST00000517250 137 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC091516.1-201ENST00000549191 703 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 MIR4425-201ENST00000580572 84 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC245884.10-201ENST00000597355 337 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 BNIP3P23-201ENST00000599655 511 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AL391001.1-201ENST00000602747 715 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC024933.1-201ENST00000608472 348 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 MIR6867-201ENST00000610636 67 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 MIR7151-201ENST00000617477 60 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 AC112204.3-201ENST00000623822 332 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 PCMTD1P7-201ENST00000634506 357 ntBASIC3.28□□□□□ -1.88
C11orf88Q6PI97 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
C11orf88Q6PI97 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 FAM133CP-201ENST00000332869 704 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 RNA5SP130-201ENST00000364431 114 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 SNORA62.3-201ENST00000365110 153 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 RNA5SP283-201ENST00000365604 119 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 RNU6-723P-201ENST00000383973 107 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 RNU6-83P-201ENST00000384568 112 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 MIR513B-201ENST00000385136 84 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 ATG3P1-201ENST00000419507 911 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 PIGFP3-201ENST00000441918 722 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC092798.1-201ENST00000458542 409 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 LARP1BP2-201ENST00000486594 519 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 RPS15AP36-201ENST00000492022 382 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 RN7SKP60-201ENST00000516985 239 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC011602.1-201ENST00000546484 331 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 HIGD1AP1-201ENST00000550979 275 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 SETP2-201ENST00000553886 926 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 DUXAP1-201ENST00000556632 463 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC068135.2-201ENST00000569293 1028 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC002545.1-201ENST00000592511 181 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC245389.1-201ENST00000605141 529 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC027449.1-201ENST00000608890 407 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AL607023.1-201ENST00000620045 248 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC018816.2-201ENST00000621460 353 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AC090617.7-201ENST00000623952 126 ntBASIC3.27□□□□□ -1.89
C11orf88Q6PI97 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
C11orf88Q6PI97 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms