Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AL158209.2-201ENST00000619266 216 ntBASIC3.64□□□□□ -1.83
LDB3O75112 AL445264.1-201ENST00000621719 171 ntBASIC3.64□□□□□ -1.83
LDB3O75112 FP236240.3-201ENST00000623061 327 ntBASIC3.64□□□□□ -1.83
LDB3O75112 AC124864.2-201ENST00000624736 186 ntBASIC3.64□□□□□ -1.83
LDB3O75112 IPO8P1-201ENST00000455509 3109 ntBASIC3.64□□□□□ -1.83
LDB3O75112 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
LDB3O75112 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.64□□□□□ -1.83
LDB3O75112 UBE3AP2-201ENST00000429033 2259 ntBASIC3.64□□□□□ -1.83
LDB3O75112 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LDB3O75112 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDB3O75112 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDB3O75112 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
LDB3O75112 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.63□□□□□ -1.83
LDB3O75112 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDB3O75112 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDB3O75112 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LDB3O75112 RNU6-1090P-201ENST00000364065 94 ntBASIC3.63□□□□□ -1.83
LDB3O75112 RNVU1-3-201ENST00000364313 161 ntBASIC3.63□□□□□ -1.83
LDB3O75112 SNORD82-201ENST00000365530 70 ntBASIC3.63□□□□□ -1.83
LDB3O75112 RNU6-730P-201ENST00000383954 104 ntBASIC3.63□□□□□ -1.83
LDB3O75112 MIR181A1-201ENST00000385026 110 ntBASIC3.63□□□□□ -1.83
LDB3O75112 SNORA57.1-201ENST00000391227 145 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB3O75112 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC092832.1-201ENST00000422934 400 ntBASIC3.63□□□□□ -1.83
LDB3O75112 GLRXP1-201ENST00000423261 334 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC007742.1-201ENST00000425789 329 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AL445669.1-201ENST00000426743 755 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB3O75112 ELOCP26-201ENST00000436067 329 ntBASIC3.63□□□□□ -1.83
LDB3O75112 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB3O75112 PGBD4P3-201ENST00000440731 581 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB3O75112 TPT1P14-201ENST00000448018 505 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC005297.2-201ENST00000450430 606 ntBASIC3.63□□□□□ -1.83
LDB3O75112 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.63□□□□□ -1.83
LDB3O75112 AL672167.3-201ENST00000465951 960 ntBASIC3.63□□□□□ -1.83
LDB3O75112 RPL31P58-201ENST00000469001 379 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC087312.1-201ENST00000471411 480 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC104563.1-201ENST00000476147 376 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AP000926.1-201ENST00000479573 241 ntBASIC3.63□□□□□ -1.83
LDB3O75112 RN7SL323P-201ENST00000494712 295 ntBASIC3.63□□□□□ -1.83
LDB3O75112 OR5H5P-201ENST00000503164 928 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB3O75112 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB3O75112 AC026402.1-201ENST00000513642 170 ntBASIC3.63□□□□□ -1.83
LDB3O75112 RNU6-430P-201ENST00000517078 107 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC022695.1-201ENST00000522089 237 ntBASIC3.63□□□□□ -1.83
LDB3O75112 OR5AP1P-201ENST00000529730 940 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.63□□□□□ -1.83
LDB3O75112 AC013828.2-201ENST00000532487 235 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB3O75112 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB3O75112 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.63□□□□□ -1.83
LDB3O75112 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB3O75112 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.63□□□□□ -1.83
LDB3O75112 AC053481.3-201ENST00000577881 843 ntBASIC3.63□□□□□ -1.83
LDB3O75112 MIR544B-201ENST00000582372 78 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC022916.3-201ENST00000592961 742 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC025588.3-201ENST00000604182 274 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC008250.2-201ENST00000615261 205 ntBASIC3.63□□□□□ -1.83
LDB3O75112 DUXAP9-208ENST00000622815 614 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC004009.2-201ENST00000623016 728 ntBASIC3.63□□□□□ -1.83
LDB3O75112 AC093591.3-201ENST00000634516 308 ntBASIC3.63□□□□□ -1.83
LDB3O75112 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LDB3O75112 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LDB3O75112 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LDB3O75112 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LDB3O75112 BDP1P-201ENST00000582658 1990 ntBASIC3.63□□□□□ -1.83
LDB3O75112 OR11H5P-202ENST00000641612 1325 ntBASIC3.63□□□□□ -1.83
LDB3O75112 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LDB3O75112 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LDB3O75112 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LDB3O75112 PNPT1P2-201ENST00000456768 2050 ntBASIC3.63□□□□□ -1.83
LDB3O75112 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LDB3O75112 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
LDB3O75112 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB3O75112 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.62□□□□□ -1.83
LDB3O75112 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LDB3O75112 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
LDB3O75112 RNU6-797P-201ENST00000363101 109 ntBASIC3.62□□□□□ -1.83
LDB3O75112 SNORA72.1-201ENST00000363485 129 ntBASIC3.62□□□□□ -1.83
LDB3O75112 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LDB3O75112 Y_RNA.450-201ENST00000384198 113 ntBASIC3.62□□□□□ -1.83
LDB3O75112 RNU6-809P-201ENST00000384461 107 ntBASIC3.62□□□□□ -1.83
LDB3O75112 MT-TC-201ENST00000387405 66 ntBASIC3.62□□□□□ -1.83
LDB3O75112 MIR708-201ENST00000390708 88 ntBASIC3.62□□□□□ -1.83
LDB3O75112 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.62□□□□□ -1.83
LDB3O75112 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.62□□□□□ -1.83
LDB3O75112 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.62□□□□□ -1.83
LDB3O75112 AC073464.1-201ENST00000429823 534 ntBASIC3.62□□□□□ -1.83
LDB3O75112 MTND3P23-201ENST00000431980 347 ntBASIC3.62□□□□□ -1.83
LDB3O75112 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.62□□□□□ -1.83
LDB3O75112 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.62□□□□□ -1.83
LDB3O75112 AC000111.3-201ENST00000433478 193 ntBASIC3.62□□□□□ -1.83
LDB3O75112 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.62□□□□□ -1.83
LDB3O75112 MTND3P21-201ENST00000433774 331 ntBASIC3.62□□□□□ -1.83
LDB3O75112 AL451074.3-201ENST00000437709 472 ntBASIC3.62□□□□□ -1.83
LDB3O75112 AC002381.1-201ENST00000447049 280 ntBASIC3.62□□□□□ -1.83
LDB3O75112 AL033528.1-201ENST00000453780 140 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms