Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
H2afb2S4R1M3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
H2afb2S4R1M3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2afb2S4R1M3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
H2afb2S4R1M3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
H2afb2S4R1M3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
H2afb2S4R1M3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
H2afb2S4R1M3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
H2afb2S4R1M3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
H2afb2S4R1M3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
H2afb2S4R1M3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
H2afb2S4R1M3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Gm36967-201ENSMUST00000193814 266 ntBASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
H2afb2S4R1M3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Gm10013-201ENSMUST00000106074 672 ntBASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2afb2S4R1M3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms