Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Phf1Q9Z1B8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.02■□□□□ -0
Phf1Q9Z1B8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Gm11336-201ENSMUST00000118168 334 ntBASIC15.02■□□□□ -0
Phf1Q9Z1B8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Phf1Q9Z1B8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Phf1Q9Z1B8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf1Q9Z1B8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf1Q9Z1B8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf1Q9Z1B8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.02□□□□□ -0.01
Phf1Q9Z1B8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Phf1Q9Z1B8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf1Q9Z1B8 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf1Q9Z1B8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf1Q9Z1B8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Phf1Q9Z1B8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Phf1Q9Z1B8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Gm27742-201ENSMUST00000184667 60 ntBASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Gm18669-201ENSMUST00000216049 778 ntBASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Gm7461-201ENSMUST00000058918 827 ntBASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Phf1Q9Z1B8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15□□□□□ -0.01
Phf1Q9Z1B8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms