Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Gm22697-201ENSMUST00000175194 63 ntBASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Gm21559-201ENSMUST00000220638 855 ntBASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Gm8587-201ENSMUST00000076538 843 ntBASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.72■□□□□ 0.11
Cldn9Q9Z0S7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cldn9Q9Z0S7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cldn9Q9Z0S7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.71■□□□□ 0.1
Cldn9Q9Z0S7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cldn9Q9Z0S7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cldn9Q9Z0S7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Gm36967-201ENSMUST00000193814 266 ntBASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Gm18101-201ENSMUST00000215769 548 ntBASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Cldn9Q9Z0S7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms