Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn5Q9WVD4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn5Q9WVD4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn5Q9WVD4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn5Q9WVD4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn5Q9WVD4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn5Q9WVD4 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.85■□□□□ 0.29
Clcn5Q9WVD4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Clcn5Q9WVD4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn5Q9WVD4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Clcn5Q9WVD4 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.85■□□□□ 0.29
Clcn5Q9WVD4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Gm13312-201ENSMUST00000119631 718 ntBASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Clcn5Q9WVD4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.83■□□□□ 0.29
Clcn5Q9WVD4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clcn5Q9WVD4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clcn5Q9WVD4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Clcn5Q9WVD4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Clcn5Q9WVD4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Clcn5Q9WVD4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Clcn5Q9WVD4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Mir5126-201ENSMUST00000175513 77 ntBASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.81■□□□□ 0.28
Clcn5Q9WVD4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms