Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.72□□□□□ -0.37
CcsQ9WU84 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.72□□□□□ -0.37
CcsQ9WU84 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.72□□□□□ -0.37
CcsQ9WU84 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CcsQ9WU84 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.72□□□□□ -0.37
CcsQ9WU84 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CcsQ9WU84 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CcsQ9WU84 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcsQ9WU84 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcsQ9WU84 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcsQ9WU84 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CcsQ9WU84 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcsQ9WU84 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcsQ9WU84 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcsQ9WU84 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcsQ9WU84 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CcsQ9WU84 Gm11927-201ENSMUST00000118472 759 ntBASIC12.71□□□□□ -0.37
CcsQ9WU84 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CcsQ9WU84 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcsQ9WU84 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.71□□□□□ -0.37
CcsQ9WU84 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.71□□□□□ -0.37
CcsQ9WU84 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.71□□□□□ -0.37
CcsQ9WU84 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcsQ9WU84 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CcsQ9WU84 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
CcsQ9WU84 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
CcsQ9WU84 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CcsQ9WU84 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.71□□□□□ -0.38
CcsQ9WU84 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
CcsQ9WU84 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Zfp783-201ENSMUST00000095946 670 ntBASIC12.7□□□□□ -0.38
CcsQ9WU84 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.7□□□□□ -0.38
CcsQ9WU84 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.7□□□□□ -0.38
CcsQ9WU84 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.7□□□□□ -0.38
CcsQ9WU84 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CcsQ9WU84 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.7□□□□□ -0.38
CcsQ9WU84 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcsQ9WU84 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcsQ9WU84 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcsQ9WU84 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcsQ9WU84 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcsQ9WU84 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcsQ9WU84 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.69□□□□□ -0.38
CcsQ9WU84 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcsQ9WU84 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcsQ9WU84 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcsQ9WU84 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CcsQ9WU84 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcsQ9WU84 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcsQ9WU84 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.69□□□□□ -0.38
CcsQ9WU84 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CcsQ9WU84 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.69□□□□□ -0.38
CcsQ9WU84 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.69□□□□□ -0.38
CcsQ9WU84 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CcsQ9WU84 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms