Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Gm6257-201ENSMUST00000163864 910 ntBASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Scn8aQ9WTU3 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Gm25990-201ENSMUST00000102440 86 ntBASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn8aQ9WTU3 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.33■□□□□ 0.21
Scn8aQ9WTU3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
Scn8aQ9WTU3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.33■□□□□ 0.21
Scn8aQ9WTU3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Scn8aQ9WTU3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.33■□□□□ 0.21
Scn8aQ9WTU3 Gm5864-201ENSMUST00000202263 970 ntBASIC16.33■□□□□ 0.21
Scn8aQ9WTU3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.33■□□□□ 0.21
Scn8aQ9WTU3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.33■□□□□ 0.21
Scn8aQ9WTU3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn8aQ9WTU3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn8aQ9WTU3 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Gm7230-201ENSMUST00000173026 815 ntBASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn8aQ9WTU3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Gm11452-201ENSMUST00000122376 690 ntBASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn8aQ9WTU3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Gm4535-201ENSMUST00000182274 558 ntBASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Gm10355-201ENSMUST00000097146 517 ntBASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn8aQ9WTU3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms