Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom3Q9QXN0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom3Q9QXN0 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom3Q9QXN0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Shroom3Q9QXN0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Shroom3Q9QXN0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Shroom3Q9QXN0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Shroom3Q9QXN0 AW822252-206ENSMUST00000208904 237 ntBASIC16.33■□□□□ 0.21
Shroom3Q9QXN0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Shroom3Q9QXN0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Gm44430-201ENSMUST00000203376 995 ntBASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.32■□□□□ 0.2
Shroom3Q9QXN0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Shroom3Q9QXN0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Gm36967-201ENSMUST00000193814 266 ntBASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Shroom3Q9QXN0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.29■□□□□ 0.2
Shroom3Q9QXN0 Gm28659-201ENSMUST00000188013 759 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms