Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx5Q9JL61 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Rfx5Q9JL61 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx5Q9JL61 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx5Q9JL61 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx5Q9JL61 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rfx5Q9JL61 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.22■□□□□ 0.35
Rfx5Q9JL61 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.21■□□□□ 0.35
Rfx5Q9JL61 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rfx5Q9JL61 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Rfx5Q9JL61 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx5Q9JL61 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Gm12895-201ENSMUST00000122214 226 ntBASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rfx5Q9JL61 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms