Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.23□□□□□ -0.29
Trem3Q9JKE1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Gm7791-201ENSMUST00000219066 539 ntBASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.23□□□□□ -0.29
Trem3Q9JKE1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trem3Q9JKE1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trem3Q9JKE1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.21□□□□□ -0.29
Trem3Q9JKE1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trem3Q9JKE1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trem3Q9JKE1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trem3Q9JKE1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trem3Q9JKE1 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.2□□□□□ -0.3
Trem3Q9JKE1 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trem3Q9JKE1 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trem3Q9JKE1 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.19□□□□□ -0.3
Trem3Q9JKE1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trem3Q9JKE1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trem3Q9JKE1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms