Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scn5aQ9JJV9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scn5aQ9JJV9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Chchd1-203ENSMUST00000224633 557 ntBASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Scn5aQ9JJV9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scn5aQ9JJV9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn5aQ9JJV9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.77■□□□□ 0.27
Scn5aQ9JJV9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn5aQ9JJV9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.27
Scn5aQ9JJV9 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.77■□□□□ 0.27
Scn5aQ9JJV9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn5aQ9JJV9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scn5aQ9JJV9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Scn5aQ9JJV9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.76■□□□□ 0.27
Scn5aQ9JJV9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Auts2-212ENSMUST00000178555 309 ntBASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn5aQ9JJV9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms