Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube4bQ9ES00 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Gm13148-201ENSMUST00000118892 745 ntBASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.74■□□□□ 0.11
Ube4bQ9ES00 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Gm10418-201ENSMUST00000100943 576 ntBASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Gm2399-201ENSMUST00000104944 225 ntBASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Gm44549-201ENSMUST00000208351 577 ntBASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube4bQ9ES00 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Gm26524-201ENSMUST00000192339 390 ntBASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Gm37179-201ENSMUST00000194862 823 ntBASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.72■□□□□ 0.11
Ube4bQ9ES00 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ube4bQ9ES00 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms