Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Mir1668-201ENSMUST00000184114 107 ntBASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Gm7213-201ENSMUST00000215977 950 ntBASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col4a3bpQ9EQG9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col4a3bpQ9EQG9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Col4a3bpQ9EQG9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col4a3bpQ9EQG9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Col4a3bpQ9EQG9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 AA414768-201ENSMUST00000121924 1257 ntBASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Gm27389-201ENSMUST00000183622 195 ntBASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.68■□□□□ 0.58
Col4a3bpQ9EQG9 Gm21559-201ENSMUST00000220638 855 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms