Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 Gm7370-201ENSMUST00000219471 767 ntBASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Chmp4cQ9D7F7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Gm30025-201ENSMUST00000218555 728 ntBASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Chmp4cQ9D7F7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Gm27463-201ENSMUST00000183569 57 ntBASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Chmp4cQ9D7F7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Gm11539-201ENSMUST00000119837 557 ntBASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Gm13436-201ENSMUST00000120418 567 ntBASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Gm10566-201ENSMUST00000086739 996 ntBASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.53■□□□□ 0.72
Chmp4cQ9D7F7 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Chmp4cQ9D7F7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Chmp4cQ9D7F7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Chmp4cQ9D7F7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Chmp4cQ9D7F7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms