Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sf3a3Q9D554 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
Sf3a3Q9D554 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Sf3a3Q9D554 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sf3a3Q9D554 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.63■□□□□ 0.25
Sf3a3Q9D554 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.63■□□□□ 0.25
Sf3a3Q9D554 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Sf3a3Q9D554 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms