Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3404Q9D506 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.36■□□□□ 0.37
Gm3404Q9D506 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3404Q9D506 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3404Q9D506 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3404Q9D506 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3404Q9D506 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3404Q9D506 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Gm3404Q9D506 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.36■□□□□ 0.37
Gm3404Q9D506 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3404Q9D506 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Gm3404Q9D506 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Gm3404Q9D506 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Gm3404Q9D506 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.35■□□□□ 0.37
Gm3404Q9D506 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.35■□□□□ 0.37
Gm3404Q9D506 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3404Q9D506 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Gm3404Q9D506 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC17.34■□□□□ 0.37
Gm3404Q9D506 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3404Q9D506 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3404Q9D506 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3404Q9D506 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3404Q9D506 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3404Q9D506 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3404Q9D506 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.33■□□□□ 0.36
Gm3404Q9D506 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.33■□□□□ 0.36
Gm3404Q9D506 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.32■□□□□ 0.36
Gm3404Q9D506 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Gm7284-201ENSMUST00000131667 944 ntBASIC17.32■□□□□ 0.36
Gm3404Q9D506 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3404Q9D506 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm3404Q9D506 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3404Q9D506 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3404Q9D506 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3404Q9D506 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3404Q9D506 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.31■□□□□ 0.36
Gm3404Q9D506 Gm14859-201ENSMUST00000117752 357 ntBASIC17.31■□□□□ 0.36
Gm3404Q9D506 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3404Q9D506 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms