Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Phf7-203ENSMUST00000226565 1971 ntBASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Gm18115-201ENSMUST00000221209 621 ntBASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ndc80Q9D0F1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Gm26039-201ENSMUST00000158152 144 ntBASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Gm22697-201ENSMUST00000175194 63 ntBASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Gm18101-201ENSMUST00000215769 548 ntBASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Gm18032-201ENSMUST00000222541 538 ntBASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndc80Q9D0F1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Gm10231-201ENSMUST00000181584 441 ntBASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Gm27389-201ENSMUST00000183622 195 ntBASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Gm10175-202ENSMUST00000208752 441 ntBASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.59■□□□□ 0.25
Ndc80Q9D0F1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms