Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ssr1Q9CY50 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssr1Q9CY50 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssr1Q9CY50 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssr1Q9CY50 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ssr1Q9CY50 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ssr1Q9CY50 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssr1Q9CY50 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssr1Q9CY50 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ssr1Q9CY50 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ssr1Q9CY50 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.71■□□□□ 0.43
Ssr1Q9CY50 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Ssr1Q9CY50 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ssr1Q9CY50 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ssr1Q9CY50 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.71■□□□□ 0.42
Ssr1Q9CY50 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Gm27011-201ENSMUST00000182352 972 ntBASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ssr1Q9CY50 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ssr1Q9CY50 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ssr1Q9CY50 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms