Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retreg3Q9CQV4 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Gm11950-201ENSMUST00000121615 838 ntBASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Gm17807-201ENSMUST00000186869 298 ntBASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Gm36967-201ENSMUST00000193814 266 ntBASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retreg3Q9CQV4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retreg3Q9CQV4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Gm7153-201ENSMUST00000117092 455 ntBASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retreg3Q9CQV4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Retreg3Q9CQV4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Gm18669-201ENSMUST00000216049 778 ntBASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retreg3Q9CQV4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms