Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Chchd1Q9CQA6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Chchd1Q9CQA6 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Chchd1Q9CQA6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Chchd1Q9CQA6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Chchd1Q9CQA6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms