Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Cdh23Q99PF4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Gm25948-201ENSMUST00000175334 112 ntBASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Cdh23Q99PF4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.56■□□□□ 0.24
Cdh23Q99PF4 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Cdh23Q99PF4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.55■□□□□ 0.24
Cdh23Q99PF4 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Cdh23Q99PF4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Gm27437-201ENSMUST00000183429 107 ntBASIC16.54■□□□□ 0.24
Cdh23Q99PF4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 Gm5177-201ENSMUST00000183092 997 ntBASIC16.53■□□□□ 0.24
Cdh23Q99PF4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cdh23Q99PF4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cdh23Q99PF4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.52■□□□□ 0.24
Cdh23Q99PF4 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms