Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trem2Q99NH8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trem2Q99NH8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trem2Q99NH8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.63■□□□□ 0.25
Trem2Q99NH8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.63■□□□□ 0.25
Trem2Q99NH8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.63■□□□□ 0.25
Trem2Q99NH8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.63■□□□□ 0.25
Trem2Q99NH8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trem2Q99NH8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trem2Q99NH8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trem2Q99NH8 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Gm10013-201ENSMUST00000106074 672 ntBASIC16.6■□□□□ 0.25
Trem2Q99NH8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Gm44430-201ENSMUST00000203376 995 ntBASIC16.6■□□□□ 0.25
Trem2Q99NH8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trem2Q99NH8 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.6■□□□□ 0.25
Trem2Q99NH8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms