Protein–RNA interactions for Protein: Q99ME3

Sncaip, Synphilin-1, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaipQ99ME3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SncaipQ99ME3 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.89■□□□□ 0.29
SncaipQ99ME3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SncaipQ99ME3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SncaipQ99ME3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.89■□□□□ 0.29
SncaipQ99ME3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SncaipQ99ME3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SncaipQ99ME3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SncaipQ99ME3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SncaipQ99ME3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SncaipQ99ME3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SncaipQ99ME3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Mir770-201ENSMUST00000103252 94 ntBASIC16.88■□□□□ 0.29
SncaipQ99ME3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.88■□□□□ 0.29
SncaipQ99ME3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SncaipQ99ME3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.87■□□□□ 0.29
SncaipQ99ME3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Gm25016-201ENSMUST00000158399 131 ntBASIC16.87■□□□□ 0.29
SncaipQ99ME3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Gm23634-201ENSMUST00000175071 91 ntBASIC16.87■□□□□ 0.29
SncaipQ99ME3 Gm6345-202ENSMUST00000180900 204 ntBASIC16.87■□□□□ 0.29
SncaipQ99ME3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Gm5587-201ENSMUST00000206270 674 ntBASIC16.87■□□□□ 0.29
SncaipQ99ME3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SncaipQ99ME3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.86■□□□□ 0.29
SncaipQ99ME3 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.86■□□□□ 0.29
SncaipQ99ME3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SncaipQ99ME3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.85■□□□□ 0.29
SncaipQ99ME3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SncaipQ99ME3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms