Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.11■□□□□ 0.81
RtcbQ99LF4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
RtcbQ99LF4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.11■□□□□ 0.81
RtcbQ99LF4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RtcbQ99LF4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RtcbQ99LF4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RtcbQ99LF4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RtcbQ99LF4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.1■□□□□ 0.81
RtcbQ99LF4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RtcbQ99LF4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.1■□□□□ 0.81
RtcbQ99LF4 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
RtcbQ99LF4 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.1■□□□□ 0.81
RtcbQ99LF4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RtcbQ99LF4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RtcbQ99LF4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RtcbQ99LF4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RtcbQ99LF4 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.1■□□□□ 0.81
RtcbQ99LF4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.1■□□□□ 0.81
RtcbQ99LF4 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RtcbQ99LF4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC20.1■□□□□ 0.81
RtcbQ99LF4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RtcbQ99LF4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RtcbQ99LF4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RtcbQ99LF4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RtcbQ99LF4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RtcbQ99LF4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RtcbQ99LF4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC20.09■□□□□ 0.81
RtcbQ99LF4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.09■□□□□ 0.81
RtcbQ99LF4 Gm14701-201ENSMUST00000117156 348 ntBASIC20.09■□□□□ 0.81
RtcbQ99LF4 Gm14057-201ENSMUST00000120631 482 ntBASIC20.09■□□□□ 0.81
RtcbQ99LF4 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RtcbQ99LF4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.09■□□□□ 0.81
RtcbQ99LF4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
RtcbQ99LF4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.09■□□□□ 0.81
RtcbQ99LF4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RtcbQ99LF4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RtcbQ99LF4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RtcbQ99LF4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RtcbQ99LF4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RtcbQ99LF4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RtcbQ99LF4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RtcbQ99LF4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RtcbQ99LF4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RtcbQ99LF4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RtcbQ99LF4 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RtcbQ99LF4 Gm11025-201ENSMUST00000140773 466 ntBASIC20.08■□□□□ 0.81
RtcbQ99LF4 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RtcbQ99LF4 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RtcbQ99LF4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RtcbQ99LF4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.08■□□□□ 0.8
RtcbQ99LF4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RtcbQ99LF4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RtcbQ99LF4 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RtcbQ99LF4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RtcbQ99LF4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
RtcbQ99LF4 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RtcbQ99LF4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RtcbQ99LF4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RtcbQ99LF4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Gm17271-201ENSMUST00000165535 355 ntBASIC20.07■□□□□ 0.8
RtcbQ99LF4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RtcbQ99LF4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RtcbQ99LF4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RtcbQ99LF4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RtcbQ99LF4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RtcbQ99LF4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RtcbQ99LF4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm4609-201ENSMUST00000106443 1002 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm5138-201ENSMUST00000113842 1002 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm15191-201ENSMUST00000117933 1000 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm12182-201ENSMUST00000118655 1008 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm13882-201ENSMUST00000120886 1002 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm10284-201ENSMUST00000145057 1005 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm10481-201ENSMUST00000179228 1002 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm2574-201ENSMUST00000181051 1002 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm3200-201ENSMUST00000181493 1002 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm8825-201ENSMUST00000182565 998 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm4518-201ENSMUST00000182638 718 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm8330-201ENSMUST00000182754 1008 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm4575-201ENSMUST00000182991 1002 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm8709-201ENSMUST00000183230 1012 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.06■□□□□ 0.8
RtcbQ99LF4 Gm45167-201ENSMUST00000208007 322 ntBASIC20.06■□□□□ 0.8
RtcbQ99LF4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms