Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cstf1Q99LC2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.28■□□□□ 0.2
Cstf1Q99LC2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Gm6550-201ENSMUST00000187574 993 ntBASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cstf1Q99LC2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cstf1Q99LC2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cstf1Q99LC2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cstf1Q99LC2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cstf1Q99LC2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cstf1Q99LC2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cstf1Q99LC2 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.27■□□□□ 0.19
Cstf1Q99LC2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cstf1Q99LC2 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.26■□□□□ 0.19
Cstf1Q99LC2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Gm27628-201ENSMUST00000184911 107 ntBASIC16.25■□□□□ 0.19
Cstf1Q99LC2 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cstf1Q99LC2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms