Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Thumpd1Q99J36 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Thumpd1Q99J36 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.59□□□□□ -0.07
Thumpd1Q99J36 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.59□□□□□ -0.07
Thumpd1Q99J36 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.59□□□□□ -0.07
Thumpd1Q99J36 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Thumpd1Q99J36 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Thumpd1Q99J36 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Thumpd1Q99J36 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Thumpd1Q99J36 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Thumpd1Q99J36 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Thumpd1Q99J36 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Thumpd1Q99J36 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Thumpd1Q99J36 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Thumpd1Q99J36 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Thumpd1Q99J36 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Actl10-202ENSMUST00000226583 1501 ntBASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.57□□□□□ -0.08
Thumpd1Q99J36 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Gm38027-201ENSMUST00000192315 235 ntBASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Thumpd1Q99J36 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thumpd1Q99J36 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms