Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1dQ99246 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.23■□□□□ 0.19
Cacna1dQ99246 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1dQ99246 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.23■□□□□ 0.19
Cacna1dQ99246 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.23■□□□□ 0.19
Cacna1dQ99246 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.23■□□□□ 0.19
Cacna1dQ99246 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1dQ99246 Gm5867-201ENSMUST00000063197 592 ntBASIC16.23■□□□□ 0.19
Cacna1dQ99246 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.22■□□□□ 0.19
Cacna1dQ99246 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.22■□□□□ 0.19
Cacna1dQ99246 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.22■□□□□ 0.19
Cacna1dQ99246 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cacna1dQ99246 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.22■□□□□ 0.19
Cacna1dQ99246 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.22■□□□□ 0.19
Cacna1dQ99246 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1dQ99246 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Gm6296-201ENSMUST00000222599 943 ntBASIC16.21■□□□□ 0.19
Cacna1dQ99246 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
Cacna1dQ99246 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.21■□□□□ 0.19
Cacna1dQ99246 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.21■□□□□ 0.19
Cacna1dQ99246 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1dQ99246 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cacna1dQ99246 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cacna1dQ99246 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Cacna1dQ99246 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cacna1dQ99246 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.2■□□□□ 0.18
Cacna1dQ99246 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cacna1dQ99246 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cacna1dQ99246 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.19■□□□□ 0.18
Cacna1dQ99246 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.19■□□□□ 0.18
Cacna1dQ99246 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.19■□□□□ 0.18
Cacna1dQ99246 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cacna1dQ99246 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms