Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Gm25026-201ENSMUST00000175017 188 ntBASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Pcdhb20Q91XZ9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Mir3081-201ENSMUST00000175305 84 ntBASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Gm27357-201ENSMUST00000183754 135 ntBASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Gm9520-201ENSMUST00000209460 1253 ntBASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 AC102542.1-201ENSMUST00000225204 1138 ntBASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb20Q91XZ9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Olfr129-201ENSMUST00000122318 993 ntBASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Gm10052-201ENSMUST00000168019 960 ntBASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Gm18669-201ENSMUST00000216049 778 ntBASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Gm7729-201ENSMUST00000050143 801 ntBASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhb20Q91XZ9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Gm43452-201ENSMUST00000201873 991 ntBASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 AC132881.2-201ENSMUST00000225474 709 ntBASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 AC154757.2-201ENSMUST00000228885 743 ntBASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Gm26226-201ENSMUST00000082509 116 ntBASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhb20Q91XZ9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb20Q91XZ9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.77■□□□□ 0.11
Pcdhb20Q91XZ9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhb20Q91XZ9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.77■□□□□ 0.11
Pcdhb20Q91XZ9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms