Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Gm5587-201ENSMUST00000206270 674 ntBASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb6Q91XZ4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb6Q91XZ4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Pcdhb6Q91XZ4 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb6Q91XZ4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb6Q91XZ4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb6Q91XZ4 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb6Q91XZ4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Pcdhb6Q91XZ4 Mir7071-201ENSMUST00000184847 69 ntBASIC16.77■□□□□ 0.28
Pcdhb6Q91XZ4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb6Q91XZ4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb6Q91XZ4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb6Q91XZ4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.77■□□□□ 0.28
Pcdhb6Q91XZ4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb6Q91XZ4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb6Q91XZ4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb6Q91XZ4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb6Q91XZ4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb6Q91XZ4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhb6Q91XZ4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb6Q91XZ4 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhb6Q91XZ4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms