Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb8Q91XZ2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Gm11336-201ENSMUST00000118168 334 ntBASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Gm26039-201ENSMUST00000158152 144 ntBASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb8Q91XZ2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb8Q91XZ2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb8Q91XZ2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb8Q91XZ2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb8Q91XZ2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb8Q91XZ2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Gm6433-201ENSMUST00000118634 875 ntBASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb8Q91XZ2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb8Q91XZ2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms