Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhga11Q91XY8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga11Q91XY8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga11Q91XY8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhga11Q91XY8 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhga11Q91XY8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pcdhga11Q91XY8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Pcdhga11Q91XY8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga11Q91XY8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga11Q91XY8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga11Q91XY8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga11Q91XY8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga11Q91XY8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga11Q91XY8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga11Q91XY8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Pcdhga11Q91XY8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga11Q91XY8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pcdhga11Q91XY8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Gm10231-201ENSMUST00000181584 441 ntBASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Gm10175-202ENSMUST00000208752 441 ntBASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Pcdhga11Q91XY8 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Gm7889-201ENSMUST00000185591 958 ntBASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Gm7370-201ENSMUST00000219471 767 ntBASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.75■□□□□ 0.11
Pcdhga11Q91XY8 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms