Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Gm15372-201ENSMUST00000120729 834 ntBASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.56■□□□□ 0.56
Pcdhgc5Q91XW9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Pcdhgc5Q91XW9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Pcdhgc5Q91XW9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Gm14026-201ENSMUST00000120625 1789 ntBASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Rps4l-201ENSMUST00000071745 943 ntBASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Pcdhgc5Q91XW9 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Mir5131-201ENSMUST00000175426 93 ntBASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Gm6296-201ENSMUST00000222599 943 ntBASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Pcdhgc5Q91XW9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhgc5Q91XW9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhgc5Q91XW9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pcdhgc5Q91XW9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.51■□□□□ 0.55
Pcdhgc5Q91XW9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms